CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDBG_07828
(
Verticillium albo atrum
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
VDBG_07828
T358040_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FGRRES_04109
M02576_2.00
Fusarium graminearum
NNNCGGNNNN
NNNNCCGNNN
PBM
Weirauch et al.(2014)
pTH8226
0.683
1.000
NCU00445
M02586_2.00
Neurospora crassa
NNCGGNNNNN
NNNNNCCGNN
PBM
Weirauch et al.(2014)
pTH8914
0.676
0.950
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VDBG_07828T0
Zinc cluster
57
102
QACIPCRRRKVRCDLGSVDNPHEPPCVRCRRESKECFFSATRRKRK
Links
Other
Zinc cluster
family TFs
Other
Verticillium albo atrum
TFs
119 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACRE_052720
Acremonium chrysogenum
ACRE_052720
I
0.676
AOL_s00215g441
Arthrobotrys oligospora
AOL_s00215g441
I
0.663
ARB_03330
Arthroderma benhamiae
ARB_03330
I
0.574
fgenesh1_pm.00710_#_124
Aspergillus carbonarius
fgenesh1_pm.00710_#_124
I
0.574
ACLA_016290
Aspergillus clavatus
CADACLAG00001582
I
0.574
CADAFLAG00009131
Aspergillus flavus
CADAFLAG00009131
I
0.574
AFUA_5G13310
Aspergillus fumigatus
CADAFUAG00006042
I
0.574
ANIA_06889
Aspergillus nidulans
CADANIAG00007690
I
0.574
CADANGAG00011408
Aspergillus niger
CADANGAG00011408
I
0.574
CADAORAG00011593
Aspergillus oryzae
CADAORAG00011593
I
0.574
ATEG_06183
Aspergillus terreus
CADATEAG00001886
I
0.574
M437DRAFT_57951
Aureobasidium melanogenum
M437DRAFT_57951
I
0.634
M438DRAFT_333229
Aureobasidium pullulans
M438DRAFT_333229
I
0.634
AUEXF2481DRAFT_2214
Aureobasidium subglaciale
AUEXF2481DRAFT_2214
I
0.634
BAUCODRAFT_31811
Baudoinia compniacensis
BAUCODRAFT_31811
I
0.581
BBA_03744
Beauveria bassiana
BBA_03744
I
0.683
COCC4DRAFT_172749
Bipolaris maydis
COCC4DRAFT_172749
I
0.683
COCMIDRAFT_27930
Bipolaris oryzae
COCMIDRAFT_27930
I
0.683
COCSADRAFT_141952
Bipolaris sorokiniana
COCSADRAFT_141952
I
0.683
COCVIDRAFT_100340
Bipolaris victoriae
COCVIDRAFT_100340
I
0.683
COCCADRAFT_109263
Bipolaris zeicola
COCCADRAFT_109263
I
0.683
BDDG_03909
Blastomyces dermatitidis
BDDG_03909
I
0.574
BDDG_07330
Blastomyces dermatitidis
BDDG_07330
I
0.545
BGHDH14_bgh04346
Blumeria graminis
BGHDH14_bgh04346
I
0.676
Bcin08g04710
Botrytis cinerea
Bcin08g04710
I
0.676
PVAR5_1796
Byssochlamys spectabilis
PVAR5_1796
I
0.574
CHGG_03119
Chaetomium globosum
CHGG_03119
I
0.682
CTHT_0026520
Chaetomium thermophilum
CTHT_0026520
I
0.682
CPUR_00998
Claviceps purpurea
CPUR_00998
I
0.654
CIMG_09377
Coccidioides immitis
CIMG_09377
I
0.574
CIMG_09809
Coccidioides immitis
CIMG_09809
I
0.545
CPC735_017550
Coccidioides posadasii
CPC735_017550
I
0.574
CPC735_022740
Coccidioides posadasii
CPC735_022740
I
0.545
estExt_fgenesh1_pg.C_180221
Cochliobolus heterostrophus C5
estExt_fgenesh1_pg.C_180221
I
0.683
CFIO01_07206
Colletotrichum fioriniae
CFIO01_07206
I
0.683
CGGC5_9480
Colletotrichum gloeosporioides
CGGC5_9480
I
0.638
GLRG_00439
Colletotrichum graminicola
GLRG_00439
I
0.683
CH063_11861
Colletotrichum higginsianum
CH063_11861
I
0.683
CH063_15177
Colletotrichum higginsianum
CH063_15177
I
0.683
Cob_05363
Colletotrichum orbiculare
Cob_05363
I
0.683
CSUB01_08637
Colletotrichum sublineola
CSUB01_08637
I
0.683
W97_09318
Coniosporium apollinis
W97_09318
I
0.683
CCM_09455
Cordyceps militaris
CCM_09455
I
0.683
estExt_Genewise1Plus.C_12014
Cryphonectria parasitica
estExt_Genewise1Plus.C_12014
I
0.683
H072_3292
Dactylellina haptotyla
H072_3292
I
0.663
DOTSEDRAFT_41728
Dothistroma septosporum
DOTSEDRAFT_41728
I
0.619
EPUS_05568
Endocarpon pusillum
EPUS_05568
I
0.565
EV44_g2662
Erysiphe necator
EV44_g2662
I
0.676
FFUJ_09555
Fusarium fujikuroi
FFUJ_09555
I
0.654
FGRRES_04109
Fusarium graminearum
FGRRES_04109
D
0.683
FOXG_11527
Fusarium oxysporum
FOXG_11527
I
0.654
FPSE_00129
Fusarium pseudograminearum
FPSE_00129
I
0.683
NechaG100921
Fusarium solani
NechaG100921
I
0.683
FVEG_10296
Fusarium verticillioides
FVEG_10296
I
0.654
GGTG_01006
Gaeumannomyces graminis
GGTG_01006
I
0.683
CMQ_3221
Grosmannia clavigera
CMQ_3221
I
0.683
HCBG_01563
Histoplasma capsulatum
HCBG_01563
I
0.574
HCBG_06235
Histoplasma capsulatum
HCBG_06235
I
0.593
LEMA_P107540.1
Leptosphaeria maculans
LEMA_P107540.1
I
0.682
MGG_15139
Magnaporthe oryzae
MGG_15139
I
0.683
MBM_01117
Marssonina brunnea
MBM_01117
I
0.676
MAC_01643
Metarhizium acridum
MAC_01643
I
0.683
MAM_00184
Metarhizium album
MAM_00184
I
0.683
MANI_117820
Metarhizium anisopliae
MANI_117820
I
0.683
MBR_02809
Metarhizium brunneum
MBR_02809
I
0.683
MGU_00202
Metarhizium guizhouense
MGU_00202
I
0.683
MAJ_02389
Metarhizium majus
MAJ_02389
I
0.683
X797_000863
Metarhizium robertsii
X797_000863
I
0.683
MCYG_03949
Microsporum canis
MCYG_03949
I
0.574
MGYG_07702
Microsporum gypseum
MGYG_07702
I
0.574
estExt_Genewise1.C_160684
Mycosphaerella fijiensis
estExt_Genewise1.C_160684
I
0.619
estExt_fgenesh1_pg.C_chr_100274
Mycosphaerella graminicola
estExt_fgenesh1_pg.C_chr_100274
I
0.619
estExt_fgenesh1_pg.C_sca_20_chr6_4_00369
Nectria haematococca
estExt_fgenesh1_pg.C_sca_20_chr6_4_00369
I
0.683
UCRNP2_8934
Neofusicoccum parvum
UCRNP2_8934
I
0.683
NFIA_073730
Neosartorya fischeri
CADNFIAG00007209
I
0.574
NCU00445
Neurospora crassa
NCU00445
D
0.676
estExt_fgenesh2_pg.C_50201
Neurospora discreta
estExt_fgenesh2_pg.C_50201
I
0.676
NEUTE1DRAFT_146594
Neurospora tetrasperma
NEUTE1DRAFT_146594
I
0.676
OIDMADRAFT_157493
Oidiodendron maius
OIDMADRAFT_157493
I
0.676
F503_04589
Ophiostoma piceae uamh
F503_04589
I
0.683
PABG_07603
Paracoccidioides brasiliensis
PABG_07603
I
0.545
PAAG_05555
Paracoccidioides sp lutzii
PAAG_05555
I
0.574
Pc21g03530
Penicillium chrysogenum
Pc21g03530
I
0.574
PMAA_034090
Penicillium marneffei
PMAA_034090
I
0.574
PDE_07343
Penicillium oxalicum
PDE_07343
I
0.574
PCH_Pc21g03530
Penicillium rubens
PCH_Pc21g03530
I
0.574
U727_0043014751
Penicillium solitum
U727_0043014751
I
0.574
PFICI_12447
Pestalotiopsis fici
PFICI_12447
I
0.683
PODANS_7_6620
Podospora anserina
PODANS_7_6620
I
0.682
MYCFIDRAFT_52991
Pseudocercospora fijiensis
MYCFIDRAFT_52991
I
0.619
GMDG_01671
Pseudogymnoascus destructans
GMDG_01671
I
0.579
V499_02322
Pseudogymnoascus pannorum
V499_02322
I
0.579
PTT_20177
Pyrenophora teres
PTT_20177
I
0.683
PTRG_05544
Pyrenophora triticirepentis
PTRG_05544
I
0.683
SAPIO_CDS2099
Scedosporium apiospermum
SAPIO_CDS2099
I
0.683
SBOR_3221
Sclerotinia borealis
SBOR_3221
I
0.676
SMAC_01881
Sordaria macrospora
SMAC_01881
I
0.676
SEPMUDRAFT_147002
Sphaerulina musiva
SEPMUDRAFT_147002
I
0.619
SPBR_05123
Sporothrix brasiliensis
SPBR_05123
I
0.683
HMPREF1624_04820
Sporothrix schenckii
HMPREF1624_04820
I
0.683
S40288_04720
Stachybotrys chartarum
S40288_04720
I
0.683
S40285_07798
Stachybotrys chlorohalonata
S40285_07798
I
0.683
PMAA_034090
Talaromyces marneffei
PMAA_034090
I
0.574
TSTA_063500
Talaromyces stipitatus
TSTA_063500
I
0.574
THITE_2118415
Thielavia terrestris
THITE_2118415
I
0.682
UCRPA7_8320
Togninia minima
UCRPA7_8320
I
0.683
VHEMI07768
Torrubiella hemipterigena
VHEMI07768
I
0.683
TRIATDRAFT_291718
Trichoderma atroviride
TRIATDRAFT_291718
I
0.654
TRIREDRAFT_59067
Trichoderma reesei
TRIREDRAFT_59067
I
0.683
TRIVIDRAFT_10694
Trichoderma virens
TRIVIDRAFT_10694
I
0.683
TEQG_03363
Trichophyton equinum
TEQG_03363
I
0.574
H101_07533
Trichophyton interdigitale
H101_07533
I
0.574
TESG_04869
Trichophyton tonsurans
TESG_04869
I
0.574
GSTUM_00004569001
Tuber melanosporum
GSTUM_00004569001
I
0.633
UREG_04936
Uncinocarpus reesii
UREG_04936
I
0.574
UV8b_2527
Ustilaginoidea virens
UV8b_2527
I
0.683
VDBG_07828
Verticillium alfalfae
VDBG_07828
I
0.683
VDAG_09694
Verticillium dahliae
VDAG_09694
I
0.683
Mycgr3G111074
Zymoseptoria tritici
Mycgr3G111074
I
0.619