CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CADANGAG00000260
(
Aspergillus niger
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
CADANGAG00000260
T361433_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
amdR
M01363_2.00
Aspergillus nidulans
NNCGGHNNNN
NNNNDCCGNN
PBM
Lambert et al.(2019)
pEX0227
0.636
0.947
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CADANGAP00000248
Zinc cluster
25
66
AACVHCHRRKVRCDARIVGLPCSNCRSAGKTDCRIHEKKKRL
Links
Other
Zinc cluster
family TFs
Other
Aspergillus niger
TFs
34 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGLB002570
Biomphalaria glabrata
BGLB002570
I
csin110955
Clonorchis sinensis
csin110955
N
DILT_0000967601
Diphyllobothrium latum
DILT_0000967601
N
EmuJ_001115800
Echinococcus multilocularis
EmuJ_001115800
N
MCOS_0000738101
Mesocestoides corti
MCOS_0000738101
N
T265_07925
Opisthorchis viverrini
T265_07925
N
PXEA_0003348601
Protopolystoma xenopodis
PXEA_0003348601
N
SSLN_0000174801
Schistocephalus solidus
SSLN_0000174801
N
SCUD_0000094701
Schistosoma curassoni
SCUD_0000094701
N
A_07348
Schistosoma haematobium
A_07348
N
Sjc_0024710
Schistosoma japonicum
Sjc_0024710
N
Smp_152660
Schistosoma mansoni
Smp_152660
N
SPER_0000337001
Spirometra erinaceieuropaei
SPER_0000337001
N
SPER_0002092701
Spirometra erinaceieuropaei
SPER_0002092701
N
SPER_0002793601
Spirometra erinaceieuropaei
SPER_0002793601
N
SPER_0003271801
Spirometra erinaceieuropaei
SPER_0003271801
N
SPER_0000189601
Spirometra erinaceieuropaei
SPER_0000189601
N
TsM_000040500
Taenia solium
TsM_000040500
N
TRE_0000926501
Trichobilharzia regenti
TRE_0000926501
N