CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CADANGAG00013867
(
Aspergillus niger
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
CADANGAG00013867
T361730_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nirA
M01350_2.00
Aspergillus nidulans
SYNCGGANNH
DNNTCCGNRS
PBM
Lambert et al.(2019)
pEX0399
0.654
0.974
nit-4
M01430_2.00
Neurospora crassa
NTCCGCGGVN
NBCCGCGGAN
PBM
Lambert et al.(2019)
pTH8909
0.629
0.897
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CADANGAP00013611
Zinc cluster
47
86
TACIACRRRKSKCDGNLPSCAACSSVYHTACVYDPNSDHR
Links
Other
Zinc cluster
family TFs
Other
Aspergillus niger
TFs
106 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CFIO01_05129
Colletotrichum fioriniae
CFIO01_05129
N
Cob_07755
Colletotrichum orbiculare
Cob_07755
N
CSUB01_02371
Colletotrichum sublineola
CSUB01_02371
N
S40285_04537
Stachybotrys chlorohalonata
S40285_04537
N