CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CGGC5_12955
(
Colletotrichum gloeosporioides
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
CGGC5_12955
T363584_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
col-22
M01424_2.00
Neurospora crassa
NNNSBCCGGVVN
NBBCCGGVSNNN
PBM
Lambert et al.(2019)
pTH8929
0.638
0.897
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ELA25973
Zinc cluster
31
69
TSCVLCQQRKVRCDKNKPCANCVKARVECRVIPPQPPRR
Links
Other
Zinc cluster
family TFs
Other
Colletotrichum gloeosporioides
TFs
50 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cob_08932
Colletotrichum orbiculare
Cob_08932
N
MYCTH_2309668
Myceliophthora thermophila
MYCTH_2309668
N
TRIREDRAFT_2096
Trichoderma reesei
TRIREDRAFT_2096
N
TRIVIDRAFT_33750
Trichoderma virens
TRIVIDRAFT_33750
N