Cob_06492 (Colletotrichum orbiculare)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 Cob_06492 T364447_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU00155
M02583_2.00 		Neurospora crassa
NNCGGNNNN
NNNNCCGNN		 PBM
Weirauch et al.(2014)
pTH8610 		0.620 0.921
ASG1
M00088_2.00 		Saccharomyces cerevisiae
CGGRDNN
NNHYCCG		 PBM
Badis et al.(2008)
ASG1_2140 		0.581 0.763
ASG1
M01581_2.00 		Saccharomyces cerevisiae
NCGGNDNN
NNHNCCGN		 PBM
Zhu et al.(2009)
Asg1 		0.581 0.763
ASG1
M07515_2.00 		Saccharomyces cerevisiae
CCGGAW
WTCCGG		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0275.1 		0.581 0.763
ASG1
M08666_2.00 		Saccharomyces cerevisiae
CCGGAW
WTCCGG		 Misc
DeBoer et al.(2011)
YIL130W_529 		0.581 0.763
ASG1
M08667_2.00 		Saccharomyces cerevisiae
CCGGVWMHMDBCCGGD
HCCGGVHKDKWBCCGG		 Misc
DeBoer et al.(2011)
YIL130W_807 		0.581 0.763
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENH85146 Zinc cluster 55 92

Links

Other Zinc cluster family TFs
Other Colletotrichum orbiculare TFs

218 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA08G47520 Glycine max GLYMA08G47520 I
GLYMA18G53954 Glycine max GLYMA18G53954 I
PGSC0003DMG400004332 Solanum tuberosum PGSC0003DMG400004332 N