CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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COCMIDRAFT_34032
(
Bipolaris oryzae
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
COCMIDRAFT_34032
T365019_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
aod-5
M02602_2.00
Neurospora crassa
NNCGGRDNNN
NNNHYCCGNN
PBM
Weirauch et al.(2014)
pTH8816
0.565
0.872
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EUC48549
Zinc cluster
62
102
RACFACQRAHLTCGDERPCNRCIKRGLQDHCMDGVRKKAKY
Links
Other
Zinc cluster
family TFs
Other
Bipolaris oryzae
TFs
109 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
L596_g26376
Steinernema carpocapsae
L596_g26376
N
L889_g9154
Steinernema feltiae
L889_g9154
N
L893_g11797
Steinernema glaseri
L893_g11797
N
L898_g32484
Steinernema monticolum
L898_g32484
N
L892_g30447
Steinernema scapterisci
L892_g30447
N