CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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COCMIDRAFT_41667
(
Bipolaris oryzae
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
COCMIDRAFT_41667
T365037_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANIA_02422
M01401_2.00
Aspergillus nidulans
NNVVCGGVD
HBCCGBBNN
PBM
Lambert et al.(2019)
pEX0286
0.541
0.690
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EUC39909
Zinc cluster
21
49
QACENCRRKKSKCTGERPNCSCCARLQQR
Links
Other
Zinc cluster
family TFs
Other
Bipolaris oryzae
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANIA_02422
Aspergillus nidulans
CADANIAG00009130
D
0.541
AUEXF2481DRAFT_31379
Aureobasidium subglaciale
AUEXF2481DRAFT_31379
I
0.542
COCVIDRAFT_102958
Bipolaris victoriae
COCVIDRAFT_102958
N
0.564
HMPREF1541_08414
Cyphellophora europaea
HMPREF1541_08414
I
0.568