CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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COCMIDRAFT_84123
(
Bipolaris oryzae
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
COCMIDRAFT_84123
T365077_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EUC49619
Zinc cluster
23
62
AACDLCRRRKVKCDGELPCAYCIRKERAATCTFSGPAPRN
Links
Other
Zinc cluster
family TFs
Other
Bipolaris oryzae
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BRADI2G48057
Brachypodium distachyon
BRADI2G48057
N
MLOC_15725
Hordeum vulgare
MLOC_15725
N
LPERR01G24570
Leersia perrieri
LPERR01G24570
N
OBART01G28660
Oryza barthii
OBART01G28660
N
OB01G37620
Oryza brachyantha
OB01G37620
N
ORGLA01G0237800
Oryza glaberrima
ORGLA01G0237800
N
OGLUM01G32660
Oryza glumaepatula
OGLUM01G32660
N
OLONG_005218
Oryza longistaminata
OLONG_005218
N
OMERI01G26210
Oryza meridionalis
OMERI01G26210
N
ONIVA01G32780
Oryza nivara
ONIVA01G32780
N
OPUNC01G28450
Oryza punctata
OPUNC01G28450
N
OS01G0713600
Oryza sativa
OS01G0713600
N
Pavir.Eb02614
Panicum virgatum
Pavir.Eb02614
N
Pavir.Ea02612
Panicum virgatum
Pavir.Ea02612
N
Si004459m.g
Setaria italica
Si004459m.g
N
Sb03g032730
Sorghum bicolor
Sb03g032730
N
Traes_3AL_1D19F288D
Triticum aestivum
Traes_3AL_1D19F288D
N
TRAES3BF111700070CFD_g
Triticum aestivum
TRAES3BF111700070CFD_g
N
Traes_3DL_2C29058E6
Triticum aestivum
Traes_3DL_2C29058E6
N
GRMZM2G035701
Zea mays
GRMZM2G035701
N