CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Ecym_7239
(
Eremothecium cymbalariae
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
Ecym_7239
T366610_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RGT1
M00092_2.00
Saccharomyces cerevisiae
CGGRDNWWHN
NDWWNHYCCG
PBM
Badis et al.(2008)
RGT1_2131
0.549
0.625
RGT1
M01585_2.00
Saccharomyces cerevisiae
HCGGADNWWN
NWWNHTCCGD
PBM
Zhu et al.(2009)
Rgt1
0.549
0.625
RGT1
M07518_2.00
Saccharomyces cerevisiae
NCGGADNAWHN
NDWTNHTCCGN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0367.1
0.549
0.625
RGT1
M08673_2.00
Saccharomyces cerevisiae
NDNNNYCGGAWWAAYHNNNN
NNNNDRTTWWTCCGRNNNHN
Misc
DeBoer et al.(2011)
YKL038W_803
0.549
0.625
RGT1
M11480_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$RGT1_Q5
0.549
0.625
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AET41084
Zinc cluster
80
121
RACDQCRRKKIKCEYREDSQSCTGCNKNNEKCAFERVPLKRG
Links
Other
Zinc cluster
family TFs
Other
Eremothecium cymbalariae
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACYPI000702
Acyrthosiphon pisum
ACYPI000702
I
0.000
PDP1
Aedes aegypti
AAEL005255
I
0.000
ENSAMEG00000014714
Ailuropoda melanoleuca
ENSAMEG00000014714
I
0.000
Alligator_sinensis_CCG020587.1
Alligator sinensis
Alligator_sinensis_CCG020587.1
I
0.000
ENSAPLG00000004386
Anas platyrhynchos
ENSAPLG00000004386
I
0.000
HLF
Anolis carolinensis
ENSACAG00000017417
I
0.000
AALB004300
Anopheles albimanus
AALB004300
I
0.000
AARA000887
Anopheles arabiensis
AARA000887
I
0.000
AATE006511
Anopheles atroparvus
AATE006511
I
0.000
ACOM039838
Anopheles coluzzii
ACOM039838
I
0.000
ACUA004794
Anopheles culicifacies
ACUA004794
I
0.000
ADAC004162
Anopheles darlingi
ADAC004162
I
0.000
ADIR007438
Anopheles dirus
ADIR007438
I
0.000
AEPI005427
Anopheles epiroticus
AEPI005427
I
0.000
AFAF017409
Anopheles farauti
AFAF017409
I
0.000
AFUN000141
Anopheles funestus
AFUN000141
I
0.000
PDP1
Anopheles gambiae
AGAP006376
I
0.000
AMEM018156
Anopheles merus
AMEM018156
I
0.000
AMIN007990
Anopheles minimus
AMIN007990
I
0.000
AQUA000938
Anopheles quadriannulatus
AQUA000938
I
0.000
ASIS001542
Anopheles sinensis
ASIS001542
I
0.000
ASTEI09431
Anopheles stephensi
ASTEI09431
I
0.000
GB43643
Apis mellifera
GB43643
I
0.000
Afo_R002997
Aptenodytes forsteri
Afo_R002997
I
0.000
ACEP27179
Atta cephalotes
ACEP27179
I
0.000
BGIBMGA003874
Bombyx mori
BGIBMGA003874
I
0.000
ENSBTAP00000008682-D1
Bos grunniens
ENSBTAP00000008682-D1
I
0.000
HLF
Bos taurus
ENSBTAG00000006618
I
0.000
Brh_R008067
Buceros rhinoceros
Brh_R008067
I
0.000
HLF
Callithrix jacchus
ENSCJAG00000011298
I
0.000
Aan_R004902
Calypte anna
Aan_R004902
I
0.000
Cflo_03674--XP_391997.2_APIME
Camponotus floridanus
Cflo_03674--XP_391997.2_APIME
I
0.000
HLF
Canis familiaris
ENSCAFG00000030851
I
0.000
CapteG178189
Capitella teleta
CapteG178189
N
0.000
ENSCPOG00000011000
Cavia porcellus
ENSCPOG00000011000
I
0.000
Cmyd_10013489
Chelonia mydas
Cmyd_10013489
I
0.000
ENSCSAG00000005557
Chlorocebus sabaeus
ENSCSAG00000005557
I
0.000
ENSCHOG00000001396
Choloepus hoffmanni
ENSCHOG00000001396
I
0.000
CpipJ_CPIJ014920
Culex pipiens
CpipJ_CPIJ014920
I
0.000
PDP1
Culex quinquefasciatus
CPIJ014920
I
0.000
KGM_06258
Danaus plexippus
KGM_06258
N
0.000
KGM_21614
Danaus plexippus
KGM_21614
I
0.000
hlfb
Danio rerio
ENSDARG00000061011
I
0.000
YQE_01842
Dendroctonus ponderosae
YQE_01842
I
0.000
ENSDORG00000012644
Dipodomys ordii
ENSDORG00000012644
I
0.000
GF24150
Drosophila ananassae
FBgn0101144
I
0.000
GG14935
Drosophila erecta
FBgn0107189
I
0.000
GH23565
Drosophila grimshawi
FBgn0131022
I
0.000
Pdp1
Drosophila melanogaster
FBgn0016694
D
0.000
GI12193
Drosophila mojavensis
FBgn0134950
I
0.000
GL17823
Drosophila persimilis
FBgn0155426
I
0.000
GA28498
Drosophila pseudoobscura
FBgn0249858
I
0.000
GM24985
Drosophila sechellia
FBgn0179846
I
0.000
GD13032
Drosophila simulans
FBgn0184754
I
0.000
GJ11425
Drosophila virilis
FBgn0198683
I
0.000
GK10510
Drosophila willistoni
FBgn0212525
I
0.000
GE20386
Drosophila yakuba
FBgn0237702
I
0.000
HLF
Echinops telfairi
ENSETEG00000017670
I
0.000
HLF
Equus caballus
ENSECAG00000016953
I
0.000
HLF
Erinaceus europaeus
ENSEEUG00000010964
I
0.000
HLF
Felis catus
ENSFCAG00000022556
I
0.000
ENSFALG00000002265
Ficedula albicollis
ENSFALG00000002265
I
0.000
HLF
Gallus gallus
ENSGALG00000003059
I
0.000
Gfo_R006518
Geospiza fortis
Gfo_R006518
I
0.000
HLF
Gorilla gorilla
ENSGGOG00000006075
I
0.000
Hsal_12188--XP_391997.2_APIME
Harpegnathos saltator
Hsal_12188--XP_391997.2_APIME
I
0.000
HMEL011029
Heliconius melpomene
HMEL011029
I
0.000
HMEL014752
Heliconius melpomene
HMEL014752
N
0.000
HLF
Homo sapiens
ENSG00000108924
D
0.000
ENSSTOG00000029018
Ictidomys tridecemlineatus
ENSSTOG00000029018
I
0.000
ENSLACG00000012726
Latimeria chalumnae
ENSLACG00000012726
I
0.000
ENSLOCG00000012233
Lepisosteus oculatus
ENSLOCG00000012233
I
0.000
HLF
Loxodonta africana
ENSLAFG00000016475
I
0.000
LCUP014933
Lucilia cuprina
LCUP014933
I
0.000
LLOJ006612
Lutzomyia longipalpis
LLOJ006612
I
0.000
ENSP00000226067
Macaca fascicularis
ENSP00000226067
I
0.000
HLF
Macaca mulatta
ENSMMUG00000022627
I
0.000
ENSMEUG00000016384
Macropus eugenii
ENSMEUG00000016384
I
0.000
MCINX004280
Melitaea cinxia
MCINX004280
I
0.000
ENSMICG00000002860
Microcebus murinus
ENSMICG00000002860
I
0.000
HLF
Monodelphis domestica
ENSMODG00000014851
I
0.000
MDOA003519
Musca domestica
MDOA003519
I
0.000
ENSMPUG00000015400
Mustela putorius furo
ENSMPUG00000015400
I
0.000
Hlf
Mus musculus
ENSMUSG00000003949
D
0.000
Myotis_brandtii_Hlf_10020713
Myotis brandtii
Myotis_brandtii_Hlf_10020713
I
0.000
HLF
Myotis lucifugus
ENSMLUG00000007393
I
0.000
NV13265
Nasonia vitripennis
NV13265
I
0.000
ENSNLEG00000007993
Nomascus leucogenys
ENSNLEG00000007993
I
0.000
HLF
Ochotona princeps
ENSOPRG00000004195
I
0.000
HLF
Ornithorhynchus anatinus
ENSOANG00000010288
I
0.000
HLF
Oryctolagus cuniculus
ENSOCUG00000010547
I
0.000
HLF
Otolemur garnettii
ENSOGAG00000007056
I
0.000
HLF
Pan troglodytes
ENSPTRG00000009424
I
0.000
ENSPANG00000022360
Papio anubis
ENSPANG00000022360
I
0.000
PHUM426270
Pediculus humanus
PHUM426270
I
0.000
ENSPSIG00000016356
Pelodiscus sinensis
ENSPSIG00000016356
I
0.000
PPAI002842
Phlebotomus papatasi
PPAI002842
I
0.000
ENSPFOG00000004560
Poecilia formosa
ENSPFOG00000004560
I
0.000
Pvit_00680
Pogona vitticeps
Pvit_00680
I
0.000
ENSPPYG00000008257
Pongo abelii
ENSPPYG00000008257
I
0.000
HLF
Pteropus vampyrus
ENSPVAG00000007461
I
0.000
Hlf
Rattus norvegicus
ENSRNOG00000002456
I
0.000
ENSSHAG00000015304
Sarcophilus harrisii
ENSSHAG00000015304
I
0.000
ENSSARG00000013841
Sorex araneus
ENSSARG00000013841
I
0.000
HLF
Taeniopygia guttata
ENSTGUG00000009478
I
0.000
hlfa
Takifugu rubripes
ENSTRUG00000003731
I
0.000
ENSTSYG00000009210
Tarsius syrichta
ENSTSYG00000009210
I
0.000
ENSTNIG00000002167
Tetraodon nigroviridis
ENSTNIG00000002167
I
0.000
hlfa
Tetraodon nigroviridis
ENSTNIG00000011274
I
0.000
D918_04648
Trichuris suis
D918_04648
N
0.000
HLF
Tupaia belangeri
ENSTBEG00000006958
I
0.000
HLF
Tursiops truncatus
ENSTTRG00000007194
I
0.000
Tal_R009182
Tyto alba
Tal_R009182
I
0.000
dbp.L
Xenopus laevis
XB-GENE-6256610
I
0.000
tef.S
Xenopus laevis
XB-GENE-962737
I
0.000
hlf
Xenopus tropicalis
XB-GENE-955698
I
0.000
XP_002937859
Xenopus tropicalis
XP_002937859
I
0.000