GLRG_03859 (Colletotrichum graminicola)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 GLRG_03859 T369564_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NEUTE1DRAFT_72988
M02580_2.00 		Neurospora tetrasperma
NNHRNNNNNN
NNNNNNYDNN		 PBM
Weirauch et al.(2014)
pTH9670 		0.542 0.795
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFQ28715 Zinc cluster 44 82

Links

Other Zinc cluster family TFs
Other Colletotrichum graminicola TFs

47 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g09678 Acanthocheilonema viteae nAv.1.0.1.g09678 I 0.000
ANCDUO_06286 Ancylostoma duodenale ANCDUO_06286 I 0.000
ASU_08868 Ascaris suum ASU_08868 I 0.000
Bm3512 Brugia malayi Bm3512 I 0.000
BTMF_0001011301 Brugia timori BTMF_0001011301 I 0.000
BXY_1717400 Bursaphelenchus xylophilus BXY_1717400 I 0.000
CBN23227 Caenorhabditis brenneri CBN23227 I 0.000
CBG11192 Caenorhabditis briggsae CBG11192 I 0.000
ceh-38 Caenorhabditis elegans WBGene00000459 I 0.000
CJA03729 Caenorhabditis japonica CJA03729 I 0.000
CRE26474 Caenorhabditis remanei CRE26474 I 0.000
DICVIV_06959 Dictyocaulus viviparus DICVIV_06959 I 0.000
nDi.2.2.2.g00186 Dirofilaria immitis nDi.2.2.2.g00186 I 0.000
DME_0000092301 Dracunculus medinensis DME_0000092301 I 0.000
EEL_0000016301 Elaeophora elaphi EEL_0000016301 I 0.000
EVEC_0000332701 Enterobius vermicularis EVEC_0000332701 I 0.000
GPLIN_001052100 Globodera pallida GPLIN_001052100 I 0.000
HCOI01220000 Haemonchus contortus HCOI01220000 I 0.000
nLs.2.1.2.g01435 Litomosoides sigmodontis nLs.2.1.2.g01435 I 0.000
LOAG_08712 Loa loa LOAG_08712 I 0.000
MhA1_Contig512.frz3.fgene1 Meloidogyne hapla MhA1_Contig512.frz3.fgene1 I 0.000
Minc16757 Meloidogyne incognita Minc16757 I 0.000
NECAME_06517 Necator americanus NECAME_06517 N 0.000
nOo.2.0.1.g10331 Onchocerca ochengi nOo.2.0.1.g10331 I 0.000
WBGene00247461 Onchocerca volvulus WBGene00247461 I 0.000
scaffold421-EXSNAP2012.16 Pristionchus exspectatus scaffold421-EXSNAP2012.16 I 0.000
RSKR_0000794200 Rhabditophanes kr3021 RSKR_0000794200 N 0.000
nRc.2.0.1.g02844 Romanomermis culicivorax nRc.2.0.1.g02844 N 0.000
L596_g1964 Steinernema carpocapsae L596_g1964 I 0.000
L889_g27415 Steinernema feltiae L889_g27415 I 0.000
L893_g20975 Steinernema glaseri L893_g20975 I 0.000
L898_g12845 Steinernema monticolum L898_g12845 I 0.000
L892_g29126 Steinernema scapterisci L892_g29126 N 0.000
SMUV_0000999101 Syphacia muris SMUV_0000999101 I 0.000
TCLT_0000779601 Thelazia callipaeda TCLT_0000779601 I 0.000
WUBG_00613 Wuchereria bancrofti WUBG_00613 N 0.000