CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLRG_09080
(
Colletotrichum graminicola
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
GLRG_09080
T369655_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU10258
M02631_2.00
Neurospora crassa
NNHCGGVN
NBCCGDNN
PBM
Weirauch et al.(2014)
pTH8978
0.683
1.000
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFQ33936
Zinc cluster
15
54
GACVRCRKGKTKCVYENGRAPCKNCAKGMHECYLPSESMA
Links
Other
Zinc cluster
family TFs
Other
Colletotrichum graminicola
TFs
43 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLOTRDRAFT_107384
Gloeophyllum trabeum
GLOTRDRAFT_107384
I
MELLADRAFT_91633
Melampsora laricipopulina
MELLADRAFT_91633
N
MELLADRAFT_95150
Melampsora laricipopulina
MELLADRAFT_95150
N
Moror_16065
Moniliophthora roreri
Moror_16065
I