CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MYCFIDRAFT_55173
(
Pseudocercospora fijiensis
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
MYCFIDRAFT_55173
T375128_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HCBG_03332
M02578_2.00
Histoplasma capsulatum
NNRATCGGRVNN
NNBYCCGATYNN
PBM
Weirauch et al.(2014)
pTH8212
0.597
0.769
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EME88173
Zinc cluster
50
88
IACILCRRRKLKCDGVKPACGTCTRLSHDCSYDEVRRKS
Links
Other
Zinc cluster
family TFs
Other
Pseudocercospora fijiensis
TFs
37 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000018305
Ailuropoda melanoleuca
ENSAMEG00000018305
I
ENSGMOG00000011081
Gadus morhua
ENSGMOG00000011081
I
ENSSTOG00000023253
Ictidomys tridecemlineatus
ENSSTOG00000023253
I
PROX2
Myotis lucifugus
ENSMLUG00000005898
I
ENSONIG00000015279
Oreochromis niloticus
ENSONIG00000015279
I
prox1a
Oryzias latipes
ENSORLG00000014947
I
ENSPMAG00000006606
Petromyzon marinus
ENSPMAG00000006606
I
ENSPFOG00000003774
Poecilia formosa
ENSPFOG00000003774
I
ENSPFOG00000007812
Poecilia formosa
ENSPFOG00000007812
N
ENSTRUG00000010061
Takifugu rubripes
ENSTRUG00000010061
I
ENSTNIG00000016354
Tetraodon nigroviridis
ENSTNIG00000016354
I
prox1a
Tetraodon nigroviridis
ENSTNIG00000016378
I
ENSXMAG00000004000
Xiphophorus maculatus
ENSXMAG00000004000
I