CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
PDE_08558
(
Penicillium oxalicum
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
PDE_08558
T377525_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU08658
M02628_2.00
Neurospora crassa
NYCGGBWAN
NTWVCCGRN
PBM
Weirauch et al.(2014)
pTH7896
0.552
0.553
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EPS33596
Zinc cluster
450
487
TGCLTCRKRRIKCDEGHPVCRNCVKSKRECLGYDPVFR
Links
Other
Zinc cluster
family TFs
Other
Penicillium oxalicum
TFs
267 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CADAFLAG00001182
Aspergillus flavus
CADAFLAG00001182
I
CADAORAG00003068
Aspergillus oryzae
CADAORAG00003068
I
COCC4DRAFT_149555
Bipolaris maydis
COCC4DRAFT_149555
N
COCMIDRAFT_87622
Bipolaris oryzae
COCMIDRAFT_87622
N
estExt_Genewise1Plus.C_220030
Cochliobolus heterostrophus C5
estExt_Genewise1Plus.C_220030
N
CFIO01_03564
Colletotrichum fioriniae
CFIO01_03564
I
CH063_14646
Colletotrichum higginsianum
CH063_14646
N
FFUJ_14508
Fusarium fujikuroi
FFUJ_14508
I
FOXG_03765
Fusarium oxysporum
FOXG_03765
I
SNOG_10151
Phaeosphaeria nodorum
SNOG_10151
N
SNOG_10151
Stagonospora nodorum
SNOG_10151
N