CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PHACADRAFT_263665
(
Phanerochaete carnosa
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
PHACADRAFT_263665
T378353_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SCHCODRAFT_67234
M01419_2.00
Schizophyllum commune
BATCGGAV
BTCCGATV
PBM
Lambert et al.(2019)
pTH9776
0.605
0.806
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EKM50386
Zinc cluster
15
52
LSCAECRRLKLRCSRVFPCASCVKKGCAAICPDGSLTT
Links
Other
Zinc cluster
family TFs
Other
Phanerochaete carnosa
TFs
77 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AB03600.1
Alternaria brassicicola
AB03600.1
N
COCC4DRAFT_24429
Bipolaris maydis
COCC4DRAFT_24429
N
COCMIDRAFT_8858
Bipolaris oryzae
COCMIDRAFT_8858
N
COCSADRAFT_254677
Bipolaris sorokiniana
COCSADRAFT_254677
N
COCCADRAFT_4091
Bipolaris zeicola
COCCADRAFT_4091
N
LEMA_P092430.1
Leptosphaeria maculans
LEMA_P092430.1
N
U727_00434280711
Penicillium solitum
U727_00434280711
N
PTT_04917
Pyrenophora teres
PTT_04917
N
PTRG_04736
Pyrenophora triticirepentis
PTRG_04736
N
SETTUDRAFT_162227
Setosphaeria turcica
SETTUDRAFT_162227
N
PV09_00936
Verruconis gallopava
PV09_00936
N