CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PV10_08688
(
Exophiala mesophila
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
PV10_08688
T382078_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU05536
M02612_2.00
Neurospora crassa
NNYGCGGAAYN
NRTTCCGCRNN
PBM
Weirauch et al.(2014)
pTH8893
0.636
0.857
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KIV89078
Zinc cluster
44
78
IACNECKRRKIKCNGQTPCQRCGNLSLDCVYAPNC
Links
Other
Zinc cluster
family TFs
Other
Exophiala mesophila
TFs
87 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PK03938.1
Cannabis sativa
PK03938.1
N
evm.TU.supercontig_55.163
Carica papaya
evm.TU.supercontig_55.163
N
GLYMA17G20175
Glycine max
GLYMA17G20175
N
Lus10035416.g
Linum usitatissimum
Lus10035416.g
N
cassava2445.valid.m1
Manihot esculenta
cassava2445.valid.m1
N
POPTR_0005s18090
Populus trichocarpa
POPTR_0005s18090
N
POPTR_0007s11170
Populus trichocarpa
POPTR_0007s11170
N
30115.m001183
Ricinus communis
30115.m001183
N
SapurV1A.0711s0090
Salix purpurea
SapurV1A.0711s0090
N
SapurV1A.0815s0020
Salix purpurea
SapurV1A.0815s0020
N