CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SEPMUDRAFT_148959
(
Sphaerulina musiva
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
SEPMUDRAFT_148959
T383565_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU07675
M02625_2.00
Neurospora crassa
NNNNCGSNWV
BWNSCGNNNN
PBM
Weirauch et al.(2014)
pTH8907
0.556
0.730
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EMF13765
Zinc cluster
82
118
SGCYTCRQRRVKCDEGHPTCERCRKGKRDCTYPGDAA
Links
Other
Zinc cluster
family TFs
Other
Sphaerulina musiva
TFs
32 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MDP0000132856
Malus domestica
MDP0000132856
I
0.000
MDP0000788505
Malus domestica
MDP0000788505
I
0.000
SapurV1A.0059s0050
Salix purpurea
SapurV1A.0059s0050
I
0.000
SapurV1A.0374s0240
Salix purpurea
SapurV1A.0374s0240
I
0.000
PGSC0003DMG401005796
Solanum tuberosum
PGSC0003DMG401005796
I
0.000