SKUD_176303 (Saccharomyces kudriavzevii)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 SKUD_176303 T383877_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CHA4
M00095_2.00 		Saccharomyces cerevisiae
NRGCGGRGAN
NTCYCCGCYN		 PBM
Badis et al.(2008)
CHA4_2113 		0.650 0.897
CHA4
M01588_2.00 		Saccharomyces cerevisiae
NNCGGVNNN
NNNBCCGNN		 PBM
Zhu et al.(2009)
Cha4 		0.650 0.897
CHA4
M07521_2.00 		Saccharomyces cerevisiae
RGCGGRGW
WCYCCGCY		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0283.1 		0.650 0.897
CHA4
M08678_2.00 		Saccharomyces cerevisiae
VNNNVVGGCGGARWTNNHVNN
NNBDNNAWYTCCGCCBBNNNB		 Misc
DeBoer et al.(2011)
YLR098C_844 		0.650 0.897
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EJT42657 Zinc cluster 44 82

Links

Other Zinc cluster family TFs
Other Saccharomyces kudriavzevii TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000001783 Ailuropoda melanoleuca ENSAMEG00000001783 N
ZBTB46 Equus caballus ENSECAG00000021082 N
ZBTB46 Felis catus ENSFCAG00000001175 N
ENSMPUG00000008570 Mustela putorius furo ENSMPUG00000008570 N
ENSNLEG00000010171 Nomascus leucogenys ENSNLEG00000010171 N
ENSOPRG00000002439 Ochotona princeps ENSOPRG00000002439 N
ENSOARG00000009948 Ovis aries ENSOARG00000009948 N
ENSPPYG00000011247 Pongo abelii ENSPPYG00000011247 N
ZBTB46 Procavia capensis ENSPCAG00000002007 N
ENSTGUG00000018263 Taeniopygia guttata ENSTGUG00000018263 N
ENSTSYG00000010671 Tarsius syrichta ENSTSYG00000010671 N
ZBTB46 Tursiops truncatus ENSTTRG00000012229 N
Tal_R008960 Tyto alba Tal_R008960 N