CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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UCRNP2_7184
(
Neofusicoccum parvum
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
UCRNP2_7184
T386570_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HCBG_03332
M02578_2.00
Histoplasma capsulatum
NNRATCGGRVNN
NNBYCCGATYNN
PBM
Weirauch et al.(2014)
pTH8212
0.618
0.846
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EOD46081
Zinc cluster
42
80
IACILCRKRKLKCDGQRPSCGTCKRLAHDCAYDEVRKKS
Links
Other
Zinc cluster
family TFs
Other
Neofusicoccum parvum
TFs
64 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ocbimv22014894m.g
Octopus bimaculoides
Ocbimv22014894m.g
I
0.000