CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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V499_02683
(
Pseudogymnoascus pannorum
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
V499_02683
T387011_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANIA_00202
M01349_2.00
Aspergillus nidulans
HBCGGNWWN
NWWNCCGVD
PBM
Lambert et al.(2019)
pEX0397
0.539
0.486
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KFY78071
Zinc cluster
26
62
TGCFTCRVRHIKCDETRPSCIRCTETGRQCDYLNPAL
Links
Other
Zinc cluster
family TFs
Other
Pseudogymnoascus pannorum
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANIA_00202
Aspergillus nidulans
CADANIAG00002530
D
0.539
estExt_fgenesh1_pg.C_chr_8.10047
Pichia stipitis
estExt_fgenesh1_pg.C_chr_8.10047
N
0.540
PODANS_3_3030
Podospora anserina
PODANS_3_3030
I
0.569
PICST_68429
Scheffersomyces stipitis
PICST_68429
N
0.540