CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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V499_08273
(
Pseudogymnoascus pannorum
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
V499_08273
T387107_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
clr-1
M02626_2.00
Neurospora crassa
NNNHTCCGGAWNN
NNWTCCGGADNNN
PBM
Weirauch et al.(2014)
pTH8805
0.602
0.895
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KFY71530
Zinc cluster
126
163
IACEICRSRKSRCDGSKPKCRLCVELGAECIYREPGIK
Links
Other
Zinc cluster
family TFs
Other
Pseudogymnoascus pannorum
TFs
71 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CFIO01_12858
Colletotrichum fioriniae
CFIO01_12858
N
CGGC5_1524
Colletotrichum gloeosporioides
CGGC5_1524
N
GLRG_00780
Colletotrichum graminicola
GLRG_00780
N
CSUB01_09306
Colletotrichum sublineola
CSUB01_09306
N