VDAG_03660 (Verticillium dahliae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 VDAG_03660 T387309_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
clr-2
M01429_2.00 		Neurospora crassa
NNNNNCGGAR
YTCCGNNNNN		 PBM
Lambert et al.(2019)
pTH11853 		0.552 0.816
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EGY22222 Zinc cluster 34 73

Links

Other Zinc cluster family TFs
Other Verticillium dahliae TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
csin104136 Clonorchis sinensis csin104136 N
T265_05336 Opisthorchis viverrini T265_05336 N
SCUD_0000209001 Schistosoma curassoni SCUD_0000209001 N
A_06351 Schistosoma haematobium A_06351 N
Smp_160710 Schistosoma mansoni Smp_160710 N
SMRZ_0001089301 Schistosoma margrebowiei SMRZ_0001089301 N
SMTD_0000083901 Schistosoma mattheei SMTD_0000083901 N
SROB_0001284501 Schistosoma rodhaini SROB_0001284501 N