CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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YNR063W
(
Saccharomyces cerevisiae
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
YNR063W
T388372_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
YNR063W
M00103_2.00
Saccharomyces cerevisiae
NNCGGVNDWN
NWHNBCCGNN
PBM
Badis et al.(2008)
YNR063W_2118
(Direct)
(Direct)
YNR063W
M01592_2.00
Saccharomyces cerevisiae
NNCGGNNDWN
NWHNNCCGNN
PBM
Zhu et al.(2009)
Ynr063w
(Direct)
(Direct)
YNR063W
M07530_2.00
Saccharomyces cerevisiae
KCGGAGAW
WTCTCCGM
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0432.1
(Direct)
(Direct)
YNR063W
M08689_2.00
Saccharomyces cerevisiae
NBNNNNTCGGAGAWNNNNNN
NNNNNNWTCTCCGANNNNVN
Misc
DeBoer et al.(2011)
YNR063W_804
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.537
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M00103_2.00
Zinc cluster
13
53
LACTVCRKRKLKCDGNKPCGRCIRLNTPKECIYNIDKRKDK
M01592_2.00
Zinc cluster
14
54
LACTVCRKRKLKCDGNKPCGRCIRLNTPKECIYNIDKRKDK
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
YNR063W
Zinc cluster
14
54
LACTVCRKRKLKCDGNKPCGRCIRLNTPKECIYNIDKRKDK
Links
Other
Zinc cluster
family TFs
Other
Saccharomyces cerevisiae
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POSPLDRAFT_103258
Postia placenta
POSPLDRAFT_103258
N