CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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e_gw1.20.1180.1
(
Nectria haematococca
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
e_gw1.20.1180.1
T389390_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU08658
M02628_2.00
Neurospora crassa
NYCGGBWAN
NTWVCCGRN
PBM
Weirauch et al.(2014)
pTH7896
0.655
0.794
ANIA_00202
M01349_2.00
Aspergillus nidulans
HBCGGNWWN
NWWNCCGVD
PBM
Lambert et al.(2019)
pEX0397
0.556
0.735
ANIA_06846
M01390_2.00
Aspergillus nidulans
VTCGGYTA
TARCCGAB
PBM
Lambert et al.(2019)
pEX0258
0.545
0.500
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
e_gw1.20.1180.1
Zinc cluster
81
114
TGCLTCRERHLKCDEASPDCLNCRKRGRECKRGV
Links
Other
Zinc cluster
family TFs
Other
Nectria haematococca
TFs
207 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action