CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
estExt_fgenesh1_pg.C_sca_94_chr7_5_00002
(
Nectria haematococca
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
estExt_fgenesh1_pg.C_sca_94_chr7_5_00002
T389659_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh1_pg.C_sca_94_chr7_5_00002
Zinc cluster
44
84
LACNACRRRKSRCDGQRPSCAACRRRGEEEPCIYAESRGQG
Links
Other
Zinc cluster
family TFs
Other
Nectria haematococca
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000012479
Ailuropoda melanoleuca
ENSAMEG00000012479
I
Alligator_sinensis_CCG005388.1
Alligator sinensis
Alligator_sinensis_CCG005388.1
I
ENSAPLG00000007170
Anas platyrhynchos
ENSAPLG00000007170
I
SP1
Anolis carolinensis
ENSACAG00000000610
I
ENSBTAP00000003929-D1
Bos grunniens
ENSBTAP00000003929-D1
I
SP1
Bos taurus
ENSBTAG00000003021
I
SP1
Callithrix jacchus
ENSCJAG00000018553
I
Aan_R009568
Calypte anna
Aan_R009568
I
SP1
Canis familiaris
ENSCAFG00000006950
I
SP1
Cavia porcellus
ENSCPOG00000023095
I
Cmyd_10006878
Chelonia mydas
Cmyd_10006878
I
ENSCSAG00000005498
Chlorocebus sabaeus
ENSCSAG00000005498
I
SP1
Choloepus hoffmanni
ENSCHOG00000001703
I
SP1
Dasypus novemcinctus
ENSDNOG00000017346
I
ENSECAG00000020197
Equus caballus
ENSECAG00000020197
I
SP1
Erinaceus europaeus
ENSEEUG00000013568
I
SP1
Felis catus
ENSFCAG00000030741
I
ENSGALG00000028401
Gallus gallus
ENSGALG00000028401
I
Gfo_R005030
Geospiza fortis
Gfo_R005030
I
SP1
Homo sapiens
ENSG00000185591
D
ENSSTOG00000005928
Ictidomys tridecemlineatus
ENSSTOG00000005928
I
SP1
Loxodonta africana
ENSLAFG00000018043
I
ENSMMUP00000026353
Macaca fascicularis
ENSMMUP00000026353
I
SP1
Macaca mulatta
ENSMMUG00000020036
I
ENSMEUG00000004493
Macropus eugenii
ENSMEUG00000004493
I
Sp1
Mus musculus
ENSMUSG00000001280
D
Myotis_brandtii_SP1_10022992
Myotis brandtii
Myotis_brandtii_SP1_10022992
I
SP1
Myotis lucifugus
ENSMLUG00000017303
I
ENSNLEG00000017699
Nomascus leucogenys
ENSNLEG00000017699
I
SP1
Ochotona princeps
ENSOPRG00000000691
I
Ogr16979
Ophisaurus gracilis
Ogr16979
I
ENSONIG00000005121
Oreochromis niloticus
ENSONIG00000005121
I
SP1
Oryctolagus cuniculus
ENSOCUG00000004147
I
sp1
Oryzias latipes
ENSORLG00000005195
I
ENSOARG00000016514
Ovis aries
ENSOARG00000016514
I
SP1
Pan troglodytes
ENSPTRG00000005014
I
ENSPANG00000018241
Papio anubis
ENSPANG00000018241
I
ENSPSIG00000007013
Pelodiscus sinensis
ENSPSIG00000007013
I
Pvit_07435
Pogona vitticeps
Pvit_07435
I
ENSPPYG00000004579
Pongo abelii
ENSPPYG00000004579
I
SP1
Procavia capensis
ENSPCAG00000004934
I
SP1
Pteropus vampyrus
ENSPVAG00000012280
I
Sp1
Rattus norvegicus
ENSRNOG00000014084
I
SP1
Sorex araneus
ENSSARG00000013480
I
SP1
Sus scrofa
ENSSSCG00000000272
I
SP1
Taeniopygia guttata
ENSTGUG00000015642
I
sp1
Takifugu rubripes
ENSTRUG00000014305
I
ENSTSYG00000001068
Tarsius syrichta
ENSTSYG00000001068
I
sp1
Tetraodon nigroviridis
ENSTNIG00000007066
I
SP1
Tupaia belangeri
ENSTBEG00000010202
I
SP1
Tursiops truncatus
ENSTTRG00000009591
I