CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pg.sca_12_chr5_2_0000041
(
Nectria haematococca
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
fgenesh1_pg.sca_12_chr5_2_0000041
T390125_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.sca_12_chr5_2_0000041
Zinc cluster
24
61
LGCLTCRAKHVKCDERLPVCRRCERLRLDCSPHWTQDH
Links
Other
Zinc cluster
family TFs
Other
Nectria haematococca
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACLA_002350
Aspergillus clavatus
CADACLAG00000323
I
0.548
AFUA_5G02800
Aspergillus fumigatus
CADAFUAG00002739
I
0.548
BDDG_05568
Blastomyces dermatitidis
BDDG_05568
N
0.539
Bcin10g01580
Botrytis cinerea
Bcin10g01580
I
0.542
gw1.9.186.1
Cryphonectria parasitica
gw1.9.186.1
I
0.550
NechaG79861
Fusarium solani
NechaG79861
N
0.683
HCBG_03369
Histoplasma capsulatum
HCBG_03369
N
0.539
NFIA_039290
Neosartorya fischeri
CADNFIAG00003792
I
0.548
PABG_03226
Paracoccidioides brasiliensis
PABG_03226
N
0.539
PAAG_02753
Paracoccidioides sp lutzii
PAAG_02753
N
0.539
SAPIO_CDS8046
Scedosporium apiospermum
SAPIO_CDS8046
I
0.542
SBOR_6332
Sclerotinia borealis
SBOR_6332
I
0.542