CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pg.sca_1_chr1_3_0001172
(
Nectria haematococca
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
fgenesh1_pg.sca_1_chr1_3_0001172
T390167_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.sca_1_chr1_3_0001172
Zinc cluster
33
72
TACKSCQDRKTRCDGSRPACSACHRRGVAVECIYENSPAS
Links
Other
Zinc cluster
family TFs
Other
Nectria haematococca
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
csin101512
Clonorchis sinensis
csin101512
N
ECANG7_02556
Echinococcus canadensis
ECANG7_02556
N
EmuJ_000967400
Echinococcus multilocularis
EmuJ_000967400
N
D915_14805
Fasciola hepatica
D915_14805
N
HDID_0000264501
Hymenolepis diminuta
HDID_0000264501
N
HmN_000508800
Hymenolepis microstoma
HmN_000508800
N
HNAJ_0000813201
Hymenolepis nana
HNAJ_0000813201
N
MCOS_0000862401
Mesocestoides corti
MCOS_0000862401
N
Sjc_0133120
Schistosoma japonicum
Sjc_0133120
N
Smp_021340
Schistosoma mansoni
Smp_021340
N