CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pg.sca_20_chr6_4_0000480
(
Nectria haematococca
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
fgenesh1_pg.sca_20_chr6_4_0000480
T390181_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.sca_20_chr6_4_0000480
Zinc cluster
10
50
RACVSCTSAKLKCTPHANGRCERCSRLGKHCEYQNMPERRR
Links
Other
Zinc cluster
family TFs
Other
Nectria haematococca
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GF22454
Drosophila ananassae
FBgn0099450
N
GG18627
Drosophila erecta
FBgn0110837
N
GH17759
Drosophila grimshawi
FBgn0125229
N
GI15092
Drosophila mojavensis
FBgn0137842
N
GL19918
Drosophila persimilis
FBgn0157515
N
GA28407
Drosophila pseudoobscura
FBgn0249767
N
GJ18900
Drosophila virilis
FBgn0206046
N
GE16280
Drosophila yakuba
FBgn0233816
N