CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgeneshPB_pg.22__185
(
Phycomyces blakesleeanus
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
fgeneshPB_pg.22__185
T390447_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PGTG_09159
M02581_2.00
Puccinia graminis
WTCGGRAN
NTYCCGAW
PBM
Weirauch et al.(2014)
pTH7836
0.570
0.795
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgeneshPB_pg.22__185
Zinc cluster
26
66
RACFHCQKAHLTCDDSRPCQRCIKRDLAATCTDAARKKAKY
Links
Other
Zinc cluster
family TFs
Other
Phycomyces blakesleeanus
TFs
103 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GYMLUDRAFT_181158
Gymnopus luxurians
GYMLUDRAFT_181158
I
0.000
PAXINDRAFT_83471
Paxillus involutus
PAXINDRAFT_83471
I
0.000
SCHCODRAFT_258883
Schizophyllum commune
SCHCODRAFT_258883
D
0.000
SCLCIDRAFT_125598
Scleroderma citrinum
SCLCIDRAFT_125598
N
0.000
SERLA73DRAFT_143290
Serpula lacrymans
SERLA73DRAFT_143290
N
0.000
CY34DRAFT_87735
Suillus luteus
CY34DRAFT_87735
N
0.000