CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
scaffold_6-snap.550.1
(
Neurospora discreta
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
scaffold_6-snap.550.1
T390552_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ff-7
M02603_2.00
Neurospora crassa
VGCGSNN
NNSCGCB
PBM
Weirauch et al.(2014)
pTH8817
0.683
1.000
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
scaffold_6-snap.550.1
Zinc cluster
260
298
TGCLTCRRRKKKCDETKPQCTNCIKGSFQCAGYPPQRGN
Links
Other
Zinc cluster
family TFs
Other
Neurospora discreta
TFs
43 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACLA_003790
Aspergillus clavatus
CADACLAG00000098
I
0.553
BBA_08203
Beauveria bassiana
BBA_08203
I
0.582
BBA_09836
Beauveria bassiana
BBA_09836
I
0.544
CaO19.1227
Candida albicans
CaO19.1227
I
0.574
CaO19.8813
Candida albicans
CaO19.8813
I
0.574
CD36_07140
Candida dubliniensis
CD36_07140
I
0.569
CHGG_08641
Chaetomium globosum
CHGG_08641
I
0.557
CTHT_0045110
Chaetomium thermophilum
CTHT_0045110
I
0.557
PV07_00139
Cladophialophora immunda
PV07_00139
I
0.563
CCM_00925
Cordyceps militaris
CCM_00925
I
0.582
estExt_fgenesh1_pg.C_60724
Cryphonectria parasitica
estExt_fgenesh1_pg.C_60724
I
0.574
PV10_02783
Exophiala mesophila
PV10_02783
I
0.553
PV11_06966
Exophiala sideris
PV11_06966
I
0.545
Z517_01830
Fonsecaea pedrosoi
Z517_01830
I
0.546
FFUJ_07470
Fusarium fujikuroi
FFUJ_07470
I
0.540
FGRRES_10069
Fusarium graminearum
FGRRES_10069
I
0.540
FPSE_00487
Fusarium pseudograminearum
FPSE_00487
I
0.540
FVEG_02704
Fusarium verticillioides
FVEG_02704
I
0.540
GGTG_06963
Gaeumannomyces graminis
GGTG_06963
I
0.582
SAKL0D14916g
Lachancea kluyveri
SAKL0D14916g
I
0.543
MGG_08093
Magnaporthe oryzae
MGG_08093
I
0.564
MAC_03890
Metarhizium acridum
MAC_03890
I
0.562
MAM_05054
Metarhizium album
MAM_05054
I
0.562
MANI_012280
Metarhizium anisopliae
MANI_012280
I
0.562
MBR_04325
Metarhizium brunneum
MBR_04325
I
0.562
MGU_05613
Metarhizium guizhouense
MGU_05613
I
0.562
MAJ_05190
Metarhizium majus
MAJ_05190
I
0.562
X797_010800
Metarhizium robertsii
X797_010800
I
0.562
MYCTH_2307450
Myceliophthora thermophila
MYCTH_2307450
I
0.557
ff-7
Neurospora crassa
NCU04001
D
0.683
NEUTE1DRAFT_49802
Neurospora tetrasperma
NEUTE1DRAFT_49802
I
0.683
PFICI_06028
Pestalotiopsis fici
PFICI_06028
I
0.559
PODANS_4_2530
Podospora anserina
PODANS_4_2530
I
0.564
PFL1_05822
Pseudozyma flocculosa
PFL1_05822
I
0.569
SMAC_06177
Sordaria macrospora
SMAC_06177
I
0.683
S40285_01325
Stachybotrys chlorohalonata
S40285_01325
I
0.564
VHEMI00428
Torrubiella hemipterigena
VHEMI00428
I
0.564
TRIATDRAFT_243083
Trichoderma atroviride
TRIATDRAFT_243083
I
0.564
TRIVIDRAFT_114462
Trichoderma virens
TRIVIDRAFT_114462
I
0.564
UV8b_8229
Ustilaginoidea virens
UV8b_8229
I
0.562
VDBG_04249
Verticillium albo atrum
VDBG_04249
I
0.548
VDBG_04249
Verticillium alfalfae
VDBG_04249
I
0.548
VDAG_01478
Verticillium dahliae
VDAG_01478
I
0.548