CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NCU01924
(
Neurospora crassa
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
NCU01924
T390572_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU01924
M02591_2.00
Neurospora crassa
NNNCGGVHN
NDBCCGNNN
PBM
Weirauch et al.(2014)
pTH9663
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.537
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M02591_2.00
Zinc cluster
52
95
IACKYCRKRKIRCSGYQNTTNGKCSNCDKLRIDCIFQPVSSNPS
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NCU01924.1
Zinc cluster
232
275
IACKYCRKRKIRCSGYQNTTNGKCSNCDKLRIDCIFQPVSSNPS
NCU01924.2
Zinc cluster
232
275
IACKYCRKRKIRCSGYQNTTNGKCSNCDKLRIDCIFQPVSSNPS
Links
Other
Zinc cluster
family TFs
Other
Neurospora crassa
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CHGG_06618
Chaetomium globosum
CHGG_06618
I
0.547
CTHT_0011610
Chaetomium thermophilum
CTHT_0011610
I
0.547
CMQ_5180
Grosmannia clavigera
CMQ_5180
I
0.571
MYCTH_2310857
Myceliophthora thermophila
MYCTH_2310857
I
0.547
F503_03643
Ophiostoma piceae uamh
F503_03643
I
0.571
PODANS_1_20900
Podospora anserina
PODANS_1_20900
I
0.547
SS1G_05175
Sclerotinia sclerotiorum
SS1G_05175
I
0.539
SPBR_04855
Sporothrix brasiliensis
SPBR_04855
I
0.571
HMPREF1624_05122
Sporothrix schenckii
HMPREF1624_05122
I
0.571
THITE_2111441
Thielavia terrestris
THITE_2111441
I
0.547