CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ada-3
(
Neurospora crassa
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
NCU02896
T390581_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ada-3
M01421_2.00
Neurospora crassa
VCKCGCGA
TCGCGMGB
PBM
Lambert et al.(2019)
pTH8620
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.537
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M01421_2.00
Zinc cluster
52
88
RSCVTCRRRKVRCDKHMPCSNCRRAQIPCIFPAPGRA
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NCU02896
Zinc cluster
64
100
RSCVTCRRRKVRCDKHMPCSNCRRAQIPCIFPAPGRA
Links
Other
Zinc cluster
family TFs
Other
Neurospora crassa
TFs
147 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACRE_019440
Acremonium chrysogenum
ACRE_019440
I
0.537
ACRE_020490
Acremonium chrysogenum
ACRE_020490
I
0.683
ACRE_030130
Acremonium chrysogenum
ACRE_030130
I
0.637
AB00861.1
Alternaria brassicicola
AB00861.1
I
0.625
ARB_01292
Arthroderma benhamiae
ARB_01292
I
0.569
MCYG_05794
Arthroderma otae
MCYG_05794
I
0.569
fgenesh1_pm.00129_#_214
Aspergillus carbonarius
fgenesh1_pm.00129_#_214
I
0.571
ACLA_030770
Aspergillus clavatus
CADACLAG00002327
I
0.571
AFUA_1G03800
Aspergillus fumigatus
CADAFUAG00009294
I
0.569
ANIA_10504
Aspergillus nidulans
CADANIAG00004652
I
0.588
CADANGAG00014030
Aspergillus niger
CADANGAG00014030
I
0.571
ATEG_03831
Aspergillus terreus
CADATEAG00008906
I
0.586
M437DRAFT_65869
Aureobasidium melanogenum
M437DRAFT_65869
I
0.625
M438DRAFT_32848
Aureobasidium pullulans
M438DRAFT_32848
I
0.625
AUEXF2481DRAFT_27177
Aureobasidium subglaciale
AUEXF2481DRAFT_27177
I
0.625
BAUCODRAFT_63686
Baudoinia compniacensis
BAUCODRAFT_63686
I
0.611
BBA_01669
Beauveria bassiana
BBA_01669
I
0.683
COCMIDRAFT_5378
Bipolaris oryzae
COCMIDRAFT_5378
I
0.553
COCSADRAFT_142075
Bipolaris sorokiniana
COCSADRAFT_142075
I
0.553
COCVIDRAFT_97148
Bipolaris victoriae
COCVIDRAFT_97148
I
0.553
COCCADRAFT_98777
Bipolaris zeicola
COCCADRAFT_98777
I
0.553
Bcin05g02960
Botrytis cinerea
Bcin05g02960
I
0.640
Bcin16g00320
Botrytis cinerea
Bcin16g00320
I
0.569
A1O1_06649
Capronia coronata
A1O1_06649
I
0.571
A1O3_10484
Capronia epimyces
A1O3_10484
I
0.571
PV04_02129
Capronia semiimmersa
PV04_02129
I
0.571
CHGG_02020
Chaetomium globosum
CHGG_02020
I
0.683
Z519_12694
Cladophialophora bantiana
Z519_12694
I
0.571
G647_09757
Cladophialophora carrionii
G647_09757
I
0.571
PV07_02419
Cladophialophora immunda
PV07_02419
I
0.571
A1O5_10159
Cladophialophora psammophila
A1O5_10159
I
0.571
A1O7_01941
Cladophialophora yegresii
A1O7_01941
I
0.571
CPUR_05074
Claviceps purpurea
CPUR_05074
I
0.683
CIMG_04610
Coccidioides immitis
CIMG_04610
I
0.548
CPC735_071910
Coccidioides posadasii
CPC735_071910
I
0.548
estExt_Genewise1Plus.C_270154
Cochliobolus heterostrophus C5
estExt_Genewise1Plus.C_270154
I
0.625
CFIO01_06708
Colletotrichum fioriniae
CFIO01_06708
I
0.637
GLRG_00909
Colletotrichum graminicola
GLRG_00909
I
0.654
CH063_12126
Colletotrichum higginsianum
CH063_12126
I
0.654
Cob_07183
Colletotrichum orbiculare
Cob_07183
I
0.654
CSUB01_10649
Colletotrichum sublineola
CSUB01_10649
I
0.654
CCM_09011
Cordyceps militaris
CCM_09011
I
0.592
estExt_Genewise1Plus.C_41920
Cryphonectria parasitica
estExt_Genewise1Plus.C_41920
I
0.683
HMPREF1541_07144
Cyphellophora europaea
HMPREF1541_07144
I
0.571
DOTSEDRAFT_127076
Dothistroma septosporum
DOTSEDRAFT_127076
I
0.628
UCREL1_10592
Eutypa lata
UCREL1_10592
I
0.563
UCREL1_7993
Eutypa lata
UCREL1_7993
I
0.620
A1O9_06866
Exophiala aquamarina
A1O9_06866
I
0.554
HMPREF1120_04361
Exophiala dermatitidis
HMPREF1120_04361
I
0.571
PV06_07997
Exophiala oligosperma
PV06_07997
I
0.574
PV11_03531
Exophiala sideris
PV11_03531
I
0.574
PV05_07659
Exophiala xenobiotica
PV05_07659
I
0.574
PV05_10700
Exophiala xenobiotica
PV05_10700
I
0.585
Z517_00016
Fonsecaea pedrosoi
Z517_00016
I
0.571
FFUJ_00433
Fusarium fujikuroi
FFUJ_00433
I
0.683
FFUJ_04592
Fusarium fujikuroi
FFUJ_04592
I
0.634
FFUJ_10471
Fusarium fujikuroi
FFUJ_10471
I
0.550
FGRRES_00800
Fusarium graminearum
FGRRES_00800
I
0.683
FGRRES_16250
Fusarium graminearum
FGRRES_16250
I
0.567
FGRRES_17664
Fusarium graminearum
FGRRES_17664
I
0.634
FOXG_01137
Fusarium oxysporum
FOXG_01137
I
0.683
FOXG_16650
Fusarium oxysporum
FOXG_16650
I
0.550
FPSE_09263
Fusarium pseudograminearum
FPSE_09263
I
0.634
FPSE_12020
Fusarium pseudograminearum
FPSE_12020
I
0.683
FPSE_12440
Fusarium pseudograminearum
FPSE_12440
I
0.567
NechaG11213
Fusarium solani
NechaG11213
I
0.567
NechaG65901
Fusarium solani
NechaG65901
I
0.683
NechaG88015
Fusarium solani
NechaG88015
I
0.606
NechaG91416
Fusarium solani
NechaG91416
I
0.634
FVEG_00379
Fusarium verticillioides
FVEG_00379
I
0.683
FVEG_13591
Fusarium verticillioides
FVEG_13591
I
0.550
GGTG_03334
Gaeumannomyces graminis
GGTG_03334
I
0.666
CMQ_5979
Grosmannia clavigera
CMQ_5979
I
0.658
LEMA_P067510.1
Leptosphaeria maculans
LEMA_P067510.1
I
0.553
MPH_06231
Macrophomina phaseolina
MPH_06231
I
0.547
MPH_09781
Macrophomina phaseolina
MPH_09781
I
0.594
MAPG_01446
Magnaporthe poae
MAPG_01446
I
0.636
MAC_05495
Metarhizium acridum
MAC_05495
I
0.683
MAM_07411
Metarhizium album
MAM_07411
I
0.683
MANI_000308
Metarhizium anisopliae
MANI_000308
I
0.683
MBR_00159
Metarhizium brunneum
MBR_00159
I
0.683
MGU_09666
Metarhizium guizhouense
MGU_09666
I
0.683
MAJ_05922
Metarhizium majus
MAJ_05922
I
0.683
X797_002513
Metarhizium robertsii
X797_002513
I
0.683
MCYG_05794
Microsporum canis
MCYG_05794
I
0.569
MGYG_02900
Microsporum gypseum
MGYG_02900
I
0.569
MYCTH_2307957
Myceliophthora thermophila
MYCTH_2307957
I
0.683
e_gw1.9.518.1
Mycosphaerella fijiensis
e_gw1.9.518.1
I
0.611
e_gw1.1.2059.1
Mycosphaerella graminicola
e_gw1.1.2059.1
I
0.611
estExt_Genewise1Plus.C_sca_1_chr1_3_01292
Nectria haematococca
estExt_Genewise1Plus.C_sca_1_chr1_3_01292
I
0.683
fgenesh1_pg.sca_76_chr13_2_0000013
Nectria haematococca
fgenesh1_pg.sca_76_chr13_2_0000013
I
0.606
fgenesh1_pm.sca_26_chr2_2_0000019
Nectria haematococca
fgenesh1_pm.sca_26_chr2_2_0000019
I
0.634
gw1.18.787.1
Nectria haematococca
gw1.18.787.1
I
0.567
UCRNP2_6697
Neofusicoccum parvum
UCRNP2_6697
I
0.594
NFIA_020870
Neosartorya fischeri
CADNFIAG00001734
I
0.569
estExt_Genewise1Plus.C_40406
Neurospora discreta
estExt_Genewise1Plus.C_40406
I
0.683
NEUTE1DRAFT_92483
Neurospora tetrasperma
NEUTE1DRAFT_92483
I
0.683
F503_07593
Ophiostoma piceae uamh
F503_07593
I
0.641
F503_08863
Ophiostoma piceae uamh
F503_08863
I
0.592
Pc16g08180
Penicillium chrysogenum
Pc16g08180
I
0.571
PEX1_002120
Penicillium expansum
PEX1_002120
I
0.571
PITC_030780
Penicillium italicum
PITC_030780
I
0.571
PITC_068620
Penicillium italicum
PITC_068620
I
0.553
PMAA_055120
Penicillium marneffei
PMAA_055120
I
0.571
PCH_Pc16g08180
Penicillium rubens
PCH_Pc16g08180
I
0.571
U727_00434000191
Penicillium solitum
U727_00434000191
I
0.571
PFICI_03077
Pestalotiopsis fici
PFICI_03077
I
0.620
SNOG_00466
Phaeosphaeria nodorum
SNOG_00466
I
0.625
PODANS_1_1340
Podospora anserina
PODANS_1_1340
I
0.659
MYCFIDRAFT_36148
Pseudocercospora fijiensis
MYCFIDRAFT_36148
I
0.611
PTT_13784
Pyrenophora teres
PTT_13784
I
0.628
PTRG_10316
Pyrenophora triticirepentis
PTRG_10316
I
0.625
Z518_05417
Rhinocladiella mackenziei
Z518_05417
I
0.574
SAPIO_CDS1279
Scedosporium apiospermum
SAPIO_CDS1279
I
0.654
SBOR_5952
Sclerotinia borealis
SBOR_5952
I
0.611
SS1G_02138
Sclerotinia sclerotiorum
SS1G_02138
I
0.569
SETTUDRAFT_19016
Setosphaeria turcica
SETTUDRAFT_19016
I
0.625
SMAC_00550
Sordaria macrospora
SMAC_00550
I
0.683
SEPMUDRAFT_148059
Sphaerulina musiva
SEPMUDRAFT_148059
I
0.564
SPBR_02264
Sporothrix brasiliensis
SPBR_02264
I
0.641
SPBR_06491
Sporothrix brasiliensis
SPBR_06491
I
0.609
HMPREF1624_06736
Sporothrix schenckii
HMPREF1624_06736
I
0.609
HMPREF1624_08785
Sporothrix schenckii
HMPREF1624_08785
I
0.641
S40288_07746
Stachybotrys chartarum
S40288_07746
I
0.683
S40285_01095
Stachybotrys chlorohalonata
S40285_01095
I
0.683
SNOG_00466
Stagonospora nodorum
SNOG_00466
I
0.625
PMAA_055120
Talaromyces marneffei
PMAA_055120
I
0.571
TSTA_017770
Talaromyces stipitatus
TSTA_017770
I
0.571
THITE_123221
Thielavia terrestris
THITE_123221
I
0.683
UCRPA7_8612
Togninia minima
UCRPA7_8612
I
0.654
VHEMI02844
Torrubiella hemipterigena
VHEMI02844
I
0.538
VHEMI05094
Torrubiella hemipterigena
VHEMI05094
I
0.683
TRIATDRAFT_172200
Trichoderma atroviride
TRIATDRAFT_172200
I
0.683
TRIREDRAFT_62297
Trichoderma reesei
TRIREDRAFT_62297
I
0.683
TRIVIDRAFT_113147
Trichoderma virens
TRIVIDRAFT_113147
I
0.683
TEQG_00822
Trichophyton equinum
TEQG_00822
I
0.569
H101_06954
Trichophyton interdigitale
H101_06954
I
0.569
H105_02238
Trichophyton soudanense
H105_02238
I
0.571
TRV_01165
Trichophyton verrucosum
TRV_01165
I
0.569
UREG_01815
Uncinocarpus reesii
UREG_01815
I
0.548
UV8b_5957
Ustilaginoidea virens
UV8b_5957
I
0.653
PV09_00486
Verruconis gallopava
PV09_00486
I
0.594
VDBG_09581
Verticillium albo atrum
VDBG_09581
I
0.567
VDBG_09581
Verticillium alfalfae
VDBG_09581
I
0.567
VDAG_04814
Verticillium dahliae
VDAG_04814
I
0.567
VDAG_06235
Verticillium dahliae
VDAG_06235
I
0.654
Mycgr3G33662
Zymoseptoria tritici
Mycgr3G33662
I
0.611