CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
14746_Multiple
(
Saccharomyces bayanus
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
14746_Multiple
T390764_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PUT3
M00091_2.00
Saccharomyces cerevisiae
NCGGRNNNNN
NNNNNYCCGN
PBM
Badis et al.(2008)
PUT3_4533
0.659
0.974
PUT3
M01584_2.00
Saccharomyces cerevisiae
NNCGGRDNN
NNHYCCGNN
PBM
Zhu et al.(2009)
Put3
0.659
0.974
PUT3
M07517_2.00
Saccharomyces cerevisiae
CCCGGGNN
NNCCCGGG
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0358.1
0.659
0.974
PUT3
M08672_2.00
Saccharomyces cerevisiae
CGSVNDDSGSNNNCYG
CRGNNNSCSHHNBSCG
Misc
DeBoer et al.(2011)
YKL015W_2065
0.659
0.974
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
14746_Multiple
Zinc cluster
32
69
VACLSCRKRHIKCPGGNPCQKCITSNAICEYLEPSKKI
Links
Other
Zinc cluster
family TFs
Other
Saccharomyces bayanus
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SU7_2028
Saccharomyces arboricola
SU7_2028
I
0.591
PUT3
Saccharomyces cerevisiae
YKL015W
D
0.659
13610_Multiple
Saccharomyces mikatae
13610_Multiple
I
0.596
13536_YKL015W
Saccharomyces paradoxus
13536_YKL015W
I
0.659