20926_YOR162C (Saccharomyces paradoxus)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 20926_YOR162C T390811_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
YRR1
M00105_2.00 		Saccharomyces cerevisiae
NCGGRNNWNN
NNWNNYCCGN		 PBM
Badis et al.(2008)
YRR1_2114 		0.679 0.949
YRR1
M01594_2.00 		Saccharomyces cerevisiae
NHGGRNDDDN
NHHHNYCCDN		 PBM
Zhu et al.(2009)
Yrr1 		0.679 0.949
YRR1
M07532_2.00 		Saccharomyces cerevisiae
RCGGRDWTWDN
NHWAWHYCCGY		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0439.1 		0.679 0.949
YRR1
M08691_2.00 		Saccharomyces cerevisiae
RCGGRDWTWDN
NHWAWHYCCGY		 Misc
DeBoer et al.(2011)
YOR162C_519 		0.679 0.949
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
20926_YOR162C Zinc cluster 52 91

Links

Other Zinc cluster family TFs
Other Saccharomyces paradoxus TFs

4 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ocbimv22001557m.g Octopus bimaculoides Ocbimv22001557m.g N
Ocbimv22001663m.g Octopus bimaculoides Ocbimv22001663m.g N
Ocbimv22016500m.g Octopus bimaculoides Ocbimv22016500m.g N
Ocbimv22020662m.g Octopus bimaculoides Ocbimv22020662m.g N
Ocbimv22027233m.g Octopus bimaculoides Ocbimv22027233m.g N
Ocbimv22032824m.g Octopus bimaculoides Ocbimv22032824m.g N
Ocbimv22033955m.g Octopus bimaculoides Ocbimv22033955m.g N
Ocbimv22037908m.g Octopus bimaculoides Ocbimv22037908m.g N