23380_YPR009W (Saccharomyces paradoxus)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 23380_YPR009W T390831_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SUT2
M01600_2.00 		Saccharomyces cerevisiae
NNCGGASHNN
NNDSTCCGNN		 PBM
Zhu et al.(2009)
Sut2 		0.683 0.974
SUT2
M08699_2.00 		Saccharomyces cerevisiae
NNNNNYTCGGASTTYNDNND
HNNHNRAASTCCGARNNNNN		 Misc
DeBoer et al.(2011)
YPR009W_869 		0.683 0.974
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
23380_YPR009W Zinc cluster 139 155
23380_YPR009W Zinc cluster 211 235

Links

Other Zinc cluster family TFs
Other Saccharomyces paradoxus TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AB00152.1 Alternaria brassicicola AB00152.1 N
ARB_04480 Arthroderma benhamiae ARB_04480 N
MCYG_05885 Arthroderma otae MCYG_05885 N
COCSADRAFT_213113 Bipolaris sorokiniana COCSADRAFT_213113 N
PVAR5_1962 Byssochlamys spectabilis PVAR5_1962 N
CHGG_05369 Chaetomium globosum CHGG_05369 N
CTHT_0072490 Chaetomium thermophilum CTHT_0072490 N
CH063_11689 Colletotrichum higginsianum CH063_11689 N
Cob_05476 Colletotrichum orbiculare Cob_05476 N
CCM_09117 Cordyceps militaris CCM_09117 N
LEMA_P068960.1 Leptosphaeria maculans LEMA_P068960.1 N
MCYG_05885 Microsporum canis MCYG_05885 N
MGYG_06086 Microsporum gypseum MGYG_06086 N
MYCTH_2061546 Myceliophthora thermophila MYCTH_2061546 N
NCU05681 Neurospora crassa NCU05681 N
estExt_Genewise1.C_170090 Neurospora discreta estExt_Genewise1.C_170090 N
NEUTE1DRAFT_80790 Neurospora tetrasperma NEUTE1DRAFT_80790 N
PFICI_12751 Pestalotiopsis fici PFICI_12751 N
PODANS_7_650 Podospora anserina PODANS_7_650 N
GMDG_08515 Pseudogymnoascus destructans GMDG_08515 N
V499_03776 Pseudogymnoascus pannorum V499_03776 N
PTT_05695 Pyrenophora teres PTT_05695 N
PTRG_10690 Pyrenophora triticirepentis PTRG_10690 N
SAPIO_CDS2052 Scedosporium apiospermum SAPIO_CDS2052 N
SETTUDRAFT_153515 Setosphaeria turcica SETTUDRAFT_153515 N
SMAC_02038 Sordaria macrospora SMAC_02038 N
SNOG_09796 Stagonospora nodorum SNOG_09796 N
TRIREDRAFT_58853 Trichoderma reesei TRIREDRAFT_58853 N