CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AB00088.1
(
Alternaria brassicicola
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
AB00088.1
T390894_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AB00088.1
Zinc cluster
42
83
VACASCRDRRIRCVVPPGEKECTQCKRAGAECIIKNDDERRR
Links
Other
Zinc cluster
family TFs
Other
Alternaria brassicicola
TFs
34 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACRE_028580
Acremonium chrysogenum
ACRE_028580
N
0.641
COCC4DRAFT_87358
Bipolaris maydis
COCC4DRAFT_87358
N
0.638
COCMIDRAFT_81530
Bipolaris oryzae
COCMIDRAFT_81530
N
0.638
COCSADRAFT_105936
Bipolaris sorokiniana
COCSADRAFT_105936
N
0.609
COCVIDRAFT_32721
Bipolaris victoriae
COCVIDRAFT_32721
N
0.638
COCCADRAFT_90976
Bipolaris zeicola
COCCADRAFT_90976
N
0.638
CTHT_0017920
Chaetomium thermophilum
CTHT_0017920
N
0.591
gw1.2.32.1
Cochliobolus heterostrophus C5
gw1.2.32.1
N
0.638
CH063_03657
Colletotrichum higginsianum
CH063_03657
N
0.648
DOTSEDRAFT_176530
Dothistroma septosporum
DOTSEDRAFT_176530
N
FFUJ_01581
Fusarium fujikuroi
FFUJ_01581
N
0.640
FGRRES_01378
Fusarium graminearum
FGRRES_01378
N
0.640
FPSE_11552
Fusarium pseudograminearum
FPSE_11552
N
0.640
NechaG74381
Fusarium solani
NechaG74381
N
0.634
fgenesh1_pg.sca_8_chr1_1_0000412
Nectria haematococca
fgenesh1_pg.sca_8_chr1_1_0000412
N
0.634
UCRNP2_4782
Neofusicoccum parvum
UCRNP2_4782
N
OIDMADRAFT_74239
Oidiodendron maius
OIDMADRAFT_74239
N
0.580
F503_03119
Ophiostoma piceae uamh
F503_03119
N
0.682
PFICI_13726
Pestalotiopsis fici
PFICI_13726
N
0.666
PODANS_5_4070
Podospora anserina
PODANS_5_4070
N
0.566
PTT_13765
Pyrenophora teres
PTT_13765
N
0.654
PTRG_10286
Pyrenophora triticirepentis
PTRG_10286
N
0.654
SETTUDRAFT_87447
Setosphaeria turcica
SETTUDRAFT_87447
N
0.638
SPBR_06366
Sporothrix brasiliensis
SPBR_06366
N
0.682
HMPREF1624_07083
Sporothrix schenckii
HMPREF1624_07083
N
0.682
SNOG_09876
Stagonospora nodorum
SNOG_09876
N
0.654
THITE_9135
Thielavia terrestris
THITE_9135
N
PV09_00164
Verruconis gallopava
PV09_00164
N
0.642
VDBG_03963
Verticillium albo atrum
VDBG_03963
N
0.653
VDBG_03963
Verticillium alfalfae
VDBG_03963
N
0.653
VDAG_01189
Verticillium dahliae
VDAG_01189
N
0.653