CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AB04837.1
(
Alternaria brassicicola
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
AB04837.1
T390924_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
aod-5
M02602_2.00
Neurospora crassa
NNCGGRDNNN
NNNHYCCGNN
PBM
Weirauch et al.(2014)
pTH8816
0.565
0.872
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AB04837.1
Zinc cluster
62
102
RACFACQRAHLTCGDERPCNRCIKRGLQDHCMDGVRKKAKY
Links
Other
Zinc cluster
family TFs
Other
Alternaria brassicicola
TFs
109 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGABI2DRAFT_214436
Agaricus bisporus
AGABI2DRAFT_214436
N
0.000
M378DRAFT_155674
Amanita muscaria
M378DRAFT_155674
N
0.000
BOTBODRAFT_172908
Botryobasidium botryosum
BOTBODRAFT_172908
N
0.000
BOTBODRAFT_69421
Botryobasidium botryosum
BOTBODRAFT_69421
N
0.000
CERSUDRAFT_110542
Ceriporiopsis subvermispora
CERSUDRAFT_110542
N
0.000
GALMADRAFT_233700
Galerina marginata
GALMADRAFT_233700
N
0.000
M413DRAFT_439826
Hebeloma cylindrosporum
M413DRAFT_439826
N
0.000
EuGene1000576
Heterobasidion annosum
EuGene1000576
N
0.000
HETIRDRAFT_377690
Heterobasidion irregulare
HETIRDRAFT_377690
N
0.000
JAAARDRAFT_148211
Jaapia argillacea
JAAARDRAFT_148211
N
0.000
K443DRAFT_673799
Laccaria amethystina
K443DRAFT_673799
N
0.000
LACBIDRAFT_300743
Laccaria bicolor
LACBIDRAFT_300743
N
0.000
Moror_1245
Moniliophthora roreri
Moror_1245
N
0.000
PAXRUDRAFT_157512
Paxillus rubicundulus
PAXRUDRAFT_157512
N
0.000
PHLGIDRAFT_180507
Phlebiopsis gigantea
PHLGIDRAFT_180507
N
0.000
PILCRDRAFT_813552
Piloderma croceum
PILCRDRAFT_813552
N
0.000
PILCRDRAFT_817327
Piloderma croceum
PILCRDRAFT_817327
N
0.000
PILCRDRAFT_611893
Piloderma croceum
PILCRDRAFT_611893
N
0.000
PIIN_04099
Piriformospora indica
PIIN_04099
N
0.000
PISMIDRAFT_91300
Pisolithus microcarpus
PISMIDRAFT_91300
N
0.000
M404DRAFT_134644
Pisolithus tinctorius
M404DRAFT_134644
N
0.000
PLEOSDRAFT_49413
Pleurotus ostreatus
PLEOSDRAFT_49413
N
0.000
V565_176710
Rhizoctonia solani
V565_176710
N
0.000
V565_049440
Rhizoctonia solani
V565_049440
N
0.000
V565_027830
Rhizoctonia solani
V565_027830
N
0.000
V565_007950
Rhizoctonia solani
V565_007950
N
0.000
SCHCODRAFT_49649
Schizophyllum commune
SCHCODRAFT_49649
N
0.000
SCHCODRAFT_104061
Schizophyllum commune
SCHCODRAFT_104061
N
0.000
SCLCIDRAFT_108680
Scleroderma citrinum
SCLCIDRAFT_108680
N
0.000
SERLA73DRAFT_49851
Serpula lacrymans
SERLA73DRAFT_49851
N
0.000
SERLA73DRAFT_84116
Serpula lacrymans
SERLA73DRAFT_84116
N
0.000
CY34DRAFT_289505
Suillus luteus
CY34DRAFT_289505
N
0.000
CY34DRAFT_25000
Suillus luteus
CY34DRAFT_25000
N
0.000
M407DRAFT_29482
Tulasnella calospora
M407DRAFT_29482
N
0.000
M407DRAFT_29721
Tulasnella calospora
M407DRAFT_29721
N
0.000