CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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EuGene6000619
(
Heterobasidion annosum
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
EuGene6000619
T391234_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SCHCODRAFT_67234
M01419_2.00
Schizophyllum commune
BATCGGAV
BTCCGATV
PBM
Lambert et al.(2019)
pTH9776
0.624
0.743
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EuGene6000619
Zinc cluster
33
69
LSCAECRRSKLKCDRSFPCQSCIRRGCAAICPDGTLA
Links
Other
Zinc cluster
family TFs
Other
Heterobasidion annosum
TFs
128 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMXG00000000644
Astyanax mexicanus
ENSAMXG00000000644
N
0.000
grhl3
Danio rerio
ENSDARG00000078552
N
0.000
ENSGMOG00000002256
Gadus morhua
ENSGMOG00000002256
N
0.000
ENSGACG00000009501
Gasterosteus aculeatus
ENSGACG00000009501
N
0.000
ENSLOCG00000002832
Lepisosteus oculatus
ENSLOCG00000002832
N
0.000
ENSONIG00000003513
Oreochromis niloticus
ENSONIG00000003513
N
0.000
ENSORLG00000014445
Oryzias latipes
ENSORLG00000014445
N
0.000
ENSPFOG00000002707
Poecilia formosa
ENSPFOG00000002707
N
0.000
grhl3
Takifugu rubripes
ENSTRUG00000010292
N
0.000
grhl3
Tetraodon nigroviridis
ENSTNIG00000017269
N
0.000