XP_002493608.1 (Pichia pastoris)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 XP_002493608.1 T392324_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ASG1
M00088_2.00 		Saccharomyces cerevisiae
CGGRDNN
NNHYCCG		 PBM
Badis et al.(2008)
ASG1_2140 		0.593 0.842
ASG1
M01581_2.00 		Saccharomyces cerevisiae
NCGGNDNN
NNHNCCGN		 PBM
Zhu et al.(2009)
Asg1 		0.593 0.842
ASG1
M07515_2.00 		Saccharomyces cerevisiae
CCGGAW
WTCCGG		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0275.1 		0.593 0.842
ASG1
M08666_2.00 		Saccharomyces cerevisiae
CCGGAW
WTCCGG		 Misc
DeBoer et al.(2011)
YIL130W_529 		0.593 0.842
ASG1
M08667_2.00 		Saccharomyces cerevisiae
CCGGVWMHMDBCCGGD
HCCGGVHKDKWBCCGG		 Misc
DeBoer et al.(2011)
YIL130W_807 		0.593 0.842
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
XP_002493608.1 Zinc cluster 50 88

Links

Other Zinc cluster family TFs
Other Pichia pastoris TFs

146 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI003697 Acyrthosiphon pisum ACYPI003697 N
AAEL004097 Aedes aegypti AAEL004097 N
AALB009972 Anopheles albimanus AALB009972 N
AARA003420 Anopheles arabiensis AARA003420 N
AATE003836 Anopheles atroparvus AATE003836 N
ACHR005166 Anopheles christyi ACHR005166 N
ACOM026226 Anopheles coluzzii ACOM026226 N
ACUA018116 Anopheles culicifacies ACUA018116 N
ADAC001260 Anopheles darlingi ADAC001260 N
ADIR000502 Anopheles dirus ADIR000502 N
AFAF001212 Anopheles farauti AFAF001212 N
AFUN009606 Anopheles funestus AFUN009606 N
AGAP012342 Anopheles gambiae AGAP012342 N
AMAM003031 Anopheles maculatus AMAM003031 N
AMEC021898 Anopheles melas AMEC021898 N
AMEM007635 Anopheles merus AMEM007635 N
AMIN009356 Anopheles minimus AMIN009356 N
ASTEI02368 Anopheles stephensi ASTEI02368 N
GB43788 Apis mellifera GB43788 N
GB43778 Apis mellifera GB43778 N
ACEP15313 Atta cephalotes ACEP15313 N
ACEP15330 Atta cephalotes ACEP15330 N
ACEP15314 Atta cephalotes ACEP15314 N
BGIBMGA008965 Bombyx mori BGIBMGA008965 N
BGIBMGA008915 Bombyx mori BGIBMGA008915 N
Cflo_06471--XP_001120327.1_APIME Camponotus floridanus Cflo_06471--XP_001120327.1_APIME N
Cflo_09321--XP_393312.1_APIME Camponotus floridanus Cflo_09321--XP_393312.1_APIME N
Cflo_12495--XP_001120327.1_APIME Camponotus floridanus Cflo_12495--XP_001120327.1_APIME N
CLEC002262 Cimex lectularius CLEC002262 N
CLEC002260 Cimex lectularius CLEC002260 N
CpipJ_CPIJ003409 Culex pipiens CpipJ_CPIJ003409 N
CPIJ003409 Culex quinquefasciatus CPIJ003409 N
KGM_14329 Danaus plexippus KGM_14329 N
KGM_04455 Danaus plexippus KGM_04455 N
DAPPUDRAFT_64307 Daphnia pulex DAPPUDRAFT_64307 N
DAPPUDRAFT_299514 Daphnia pulex DAPPUDRAFT_299514 N
YQE_12730 Dendroctonus ponderosae YQE_12730 N
YQE_12733 Dendroctonus ponderosae YQE_12733 N
HHAL003217-PA Halyomorpha halys HHAL003217-PA N
Hsal_08372--XP_393312.1_APIME Harpegnathos saltator Hsal_08372--XP_393312.1_APIME N
Hsal_08385--XP_001120327.1_APIME Harpegnathos saltator Hsal_08385--XP_001120327.1_APIME N
HMEL008302 Heliconius melpomene HMEL008302 N
HMEL013921 Heliconius melpomene HMEL013921 N
LDEC006635 Leptinotarsa decemlineata LDEC006635 N
LDEC006636 Leptinotarsa decemlineata LDEC006636 N
LDEC015408 Leptinotarsa decemlineata LDEC015408 N
LLOJ009833 Lutzomyia longipalpis LLOJ009833 N
LLOJ005066 Lutzomyia longipalpis LLOJ005066 N
MCINX007973 Melitaea cinxia MCINX007973 N
PHUM375930 Pediculus humanus PHUM375930 N
PHUM375920 Pediculus humanus PHUM375920 N
PPAI000981 Phlebotomus papatasi PPAI000981 N
RPRC006229 Rhodnius prolixus RPRC006229 N
SINV15880 Solenopsis invicta SINV15880 N
SINV15898 Solenopsis invicta SINV15898 N
TC005541 Tribolium castaneum TC005541 N
TC006580 Tribolium castaneum TC006580 N
L798_10928 Zootermopsis nevadensis L798_10928 I
L798_10927 Zootermopsis nevadensis L798_10927 N
L798_10924 Zootermopsis nevadensis L798_10924 I