CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Thhalv10012377m.g
(
Eutrema salsugineum
)
AP2,B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
PF02362 (B3)
IPR001471
IPR003340
Thhalv10012377m.g
T010643_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10012377m
AP2
83
132
ARYKGVFQQQNGHWGAQIYAGHKRIWLGTFKSATEAATAYDSASIKIRPH
Thhalv10012377m
B3
209
324
FTKKLTPSDVGKLNRLVIPKKYAVKHLPPLSVDQNEREEGEVGGSVDDVEVVFYDKAKTQWKFKYCYMRTSQTFAFTIGWNRFVKEKKLKENDVIVFYQCNDECGFKKMIDVQSNK
Links
Other
AP2,B3
family TFs
Other
Eutrema salsugineum
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo3g179890
Brassica oleracea
Bo3g179890
N
0.739
Bra014282
Brassica rapa
Bra014282
N
0.732
Bra018868
Brassica rapa
Bra018868
N
0.706