CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nAv.1.0.1.g05784
(
Acanthocheilonema viteae
)
ARID/BRIGHT,RFX
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01388 (ARID)
PF02257 (RFX_DNA_binding)
IPR001606
IPR003150
nAv.1.0.1.g05784
T016986_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nAv.1.0.1.t05784-RA
ARID/BRIGHT
26
112
RCSEFHMHLRTFYKKRWNCRLKSPHIQGVEVDLFRLYDTVISMGGWQKVSFNEKWGDIARAIGLTNGVAVAEHAIKVLYMRYLSKYE
nAv.1.0.1.t05784-RA
RFX
539
616
EQLTAKWIRMNCIFEMGSVVPRGELYASYVDDLRHRYGALSGSVQTFTNIMRAVYPNVILRVQSSSGSNMPFFENIKM
Links
Other
ARID/BRIGHT,RFX
family TFs
Other
Acanthocheilonema viteae
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
nLs.2.1.2.g02490
Litomosoides sigmodontis
nLs.2.1.2.g02490
N
0.957
nOo.2.0.1.g02850
Onchocerca ochengi
nOo.2.0.1.g02850
N
0.933
WBGene00247785
Onchocerca volvulus
WBGene00247785
N
0.933
LOAG_00875
Loa loa
LOAG_00875
N
0.926
EEL_0000681701
Elaeophora elaphi
EEL_0000681701
N
0.909
Bm2065
Brugia malayi
Bm2065
N
0.736