CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gene29444-v1.0-hybrid
(
Fragaria vesca
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
gene29444-v1.0-hybrid
T023268_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna29444.1-v1.0-hybrid
B3
13
95
LFRFKKIPKKFVKKYGEHLSDSVCLKIPSGCEWEVGVTRNGNKVWFEQGWPAFAKFYSLDYGVFLLFRYEGNSKFQVCIFDTS
mrna29444.1-v1.0-hybrid
B3
217
326
FSIVTMHPSYVQRNTMNLRGSFVKNFATQHQLVKLQVGDRSWPVKLNIYHKGSSIAKLSGGWPAFCQENSLSDGDVCIFELIQVNDVKIPPKFVMKYGDYLSKSVRLKLP
mrna29444.1-v1.0-hybrid
B3
341
432
FFKVIVEESSSIKLKIPPKFVMKYGDYLSKSVRLKLPSGCQWQVEVTKSDSEVWFDKGWPEFFKFYTLNYGHFVIFTYHGNSMFEVCIFDRT
mrna29444.1-v1.0-hybrid
B3
523
612
FIMIFMQPSYIHRYSVSIPFRFVMNFAKFRQQVVKLLVGDRSWPARLNVSSLHGKAKISSGWHEFVIENHLRLGDVCIFELMEIASVDSL
mrna29444.1-v1.0-hybrid
B3
653
736
THPVVQEIPKKFMIKHGKNLSSLVCLKLPSGSDWEVELTRCNSKAWFEKGWPEFSRFCSVDYGYFLVFRYQGNSTFEVCIFDRS
mrna29444.1-v1.0-hybrid
B3
867
966
FFKISMELSNIHKSILYLPSEFAQRHLIKLPAGIATLQVSSGRTLSAKTWSVKFKYDHKKSKAHFLNGWSDFVRDNHLKVGDMCGFILIDRYEFLFEVAL
mrna29444.1-v1.0-hybrid
B3
1048
1134
FFVVTLGTLHKEKSNVYLPASFVKSFIKEAKQTVRLLVKDRSWPVKLFCYGKTSAKFSGGWAAFAKEHQLEKGDICIFELTEMNDVK
mrna29444.1-v1.0-hybrid
B3
1128
1211
TEMNDVKIPKHFLIKYGQDLSNSVHLKLPSGSEWEVELRRCNGKAWFERGWPEFSRFCSLDYGAFLVFRYQGNSQFDVCIFDKS
mrna29444.1-v1.0-hybrid
B3
1322
1416
FKMAMQPSHIHFGGKIELPRNFSKRHLKLPAGIAILRISDGRTWSVKFKYDHKNSKARFSCGWSLFVRDNNLKVGDVCVFVLIDCNELLFEVILF
mrna29444.1-v1.0-hybrid
B3
1492
1582
YFSVPLRSGHRKNVNVQASFFKSFFNRKKQTVKLQVEDRSWPVNLVPNGNFAGRLSGGWARFAKEHCLKEGDVCIFELTEMNGSALKVHKS
mrna29444.1-v1.0-hybrid
B3
1612
1704
FIQVILDDTSRHVKLGIPKKFVNEYCRGLSDSVCLKLPSGSEWEVEVTRSNGKVWFEKCWPEFSKFYSLGIGDFLVFEYEGNSEFNVFIFDRS
mrna29444.1-v1.0-hybrid
B3
1845
1940
YFKVVMQPTYIQKGYLAVPSEFSKRHLTNQPATVTLQVLDGRSWSVQLKYYHERAEVRFQNCWPLFVRGNNLKVGDVCVFTLINCSEFLFEVVFYP
mrna29444.1-v1.0-hybrid
B3
2029
2124
FFKVTLGFCHMGKSAVHLPASFAWSFIKREKEKVWLQVTDRLWPVDLTVFKPSLASFSSGWDTFVEEYSLRVGDVCIFELMEMDDDIILQVHFFRC
Links
Other
B3
family TFs
Other
Fragaria vesca
TFs
0 Related TFs
">No related TF found