CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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scaffold291-EXSNAP2012.15
(
Pristionchus exspectatus
)
BED ZF,C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
PF00096 (zf-C2H2)
IPR003656
IPR007087
scaffold291-EXSNAP2012.15
T025157_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
scaffold291-EXSNAP2012.15
C2H2 ZF
320
342
VCDVCGEVFMTGEILEEHMKNAH
scaffold291-EXSNAP2012.15
C2H2 ZF
466
488
VCDVCGEVFMTGEILEEHMKNAH
scaffold291-EXSNAP2012.15
C2H2 ZF
678
694
VTYTDLSKLRKHMREVH
scaffold291-EXSNAP2012.15
C2H2 ZF
699
723
YECGTCEAKFAMRKELMGHLKKEGH
scaffold291-EXSNAP2012.15
BED ZF
899
934
ASSESETDEGAVQCDICEELFEGRDAFKGHLKSAHV
scaffold291-EXSNAP2012.15
C2H2 ZF
967
990
VQCDICEEYFEDREQFEEHLMESH
Links
Other
BED ZF,C2H2 ZF
family TFs
Other
Pristionchus exspectatus
TFs
0 Related TFs
">No related TF found