CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Y48G1C.6
(
Caenorhabditis elegans
)
Brinker
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF09607 (BrkDBD)
IPR018586
WBGene00021679
T055744_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Y48G1C.6
M00591_2.00
Caenorhabditis elegans
NVYGCAANNN
NNNTTGCRBN
PBM
Narasimhan et al.(2015)
pTH10769
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.700
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M00591_2.00
Brinker
13
65
RKRTYDLKFKLHAINYALEHKNISKAAKDLNVNRQNIQQWIAQKAEIEKQLED
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Y48G1C.6
Brinker
13
65
RKRTYDLKFKLHAINYALEHKNISKAAKDLNVNRQNIQQWIAQKAEIEKQLED
Links
Other
Brinker
family TFs
Other
Caenorhabditis elegans
TFs
0 Related TFs
">No related TF found