CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CGI_10012804
(
Crassostrea gigas
)
C2H2 ZF,Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
PF00046 (Homeobox)
IPR007087
IPR001356
CGI_10012804
T075740_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EKC25460
C2H2 ZF
111
133
LCPLCQEEFKDMTRLERHLMSTH
EKC25460
C2H2 ZF
215
239
YRCQTCSKTFGNIDGLYAHQNELGH
EKC25460
C2H2 ZF
251
276
YLCWKKGCNQYFKTAQALQVHFREIH
EKC25460
C2H2 ZF
292
314
YKCTQCSLAFKNSDKLQLHSHFH
EKC25460
C2H2 ZF
320
343
TKCNYCGQSFGSIAALRKHVESGH
EKC25460
C2H2 ZF
480
504
FKCHRCKVAFTKQNYLTAHNKTLLH
EKC25460
C2H2 ZF
524
548
FKCDICKESFTQKNILVVHYNSVSH
EKC25460
C2H2 ZF
596
620
YKCNICKVSYSQGSTLDIHIRSVGH
EKC25460
C2H2 ZF
754
775
YPCNRCNAVFINQENLAQHQMV
EKC25460
C2H2 ZF
875
898
SVCVTCKKEFSSLWVLKSHQEEVH
EKC25460
Homeodomain
1052
1108
KRARTRINDEQLKILRAHFDINNSPSEEQINAMSEQSGLPQKVIKHWFRNTLFKERQ
EKC25460
Homeodomain
1159
1215
RANRTRFTDYQIKVLQEYFEQNAYPKDDELDHLSQMLNLSPRVIVVWFQNARQKARK
EKC25460
C2H2 ZF
1245
1266
YQCKKCSAVFQRYYDLIRHQKK
EKC25460
C2H2 ZF
1324
1346
FKCEKCHLSFDGLEHWQEHQAVH
EKC25460
Homeodomain
1402
1458
KRLRTTILPEQLDYLYQKYQIDCNPSRKQLETISAEVGLKKRVVQVWFQNTRARERK
EKC25460
C2H2 ZF
1470
1493
KRCPFCRALFRAKSALESHLATKH
EKC25460
Homeodomain
1683
1739
KRYRTQMTSLQVRIMKSIFIDYKTPTMAECEMLGREIGLPKRVVQVWFQNARAKEKK
Links
Other
C2H2 ZF,Homeodomain
family TFs
Other
Crassostrea gigas
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ocbimv22000812m.g
Octopus bimaculoides
Ocbimv22000812m.g
N
0.746