CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSXMAG00000006005
(
Xiphophorus maculatus
)
C2H2 ZF,Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
PF00046 (Homeobox)
IPR007087
IPR001356
ENSXMAG00000006005
T076050_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZEB1
M08080_2.00
Homo sapiens
NNCACCTGBNN
NNVCAGGTGNN
ChIP-seq
Mathelier et al.(2014)
MA0103.3
0.824
0.824
ZEB1
M07842_2.00
Homo sapiens
YNCACCTG
CAGGTGNR
ChIP-seq
Gerstein et al.(2012)
GM12878_ZEB1_HudsonAlpha
0.824
0.824
ZEB1
M08190_2.00
Homo sapiens
CVCWCACCTG
CAGGTGWGBG
ChIP-seq
Contrino et al.(2012)
Mv136
0.824
0.824
ZEB1
M08848_2.00
Homo sapiens
YHYACCTGBV
BVCAGGTRDR
Misc
Kulakovskiy et al.(2013)
ZEB1_HUMAN.H11MO.0.A
0.824
0.824
ZEB1
M10089_2.00
Homo sapiens
NHYDYACCTGWVY
RBWCAGGTRHRDN
Transfac
Matys et al.(2006)
V$AREB6_01
0.824
0.824
ZEB1
M10090_2.00
Homo sapiens
WHWCACCTKWNN
NNWMAGGTGWDW
Transfac
Matys et al.(2006)
V$AREB6_02
0.824
0.824
ZEB1
M10091_2.00
Homo sapiens
VBRCACCTGKDV
BHMCAGGTGYVB
Transfac
Matys et al.(2006)
V$AREB6_03
0.824
0.824
ZEB1
M10092_2.00
Homo sapiens
NNSAAACVB
VBGTTTSNN
Transfac
Matys et al.(2006)
V$AREB6_04
0.824
0.824
ZEB1
M10093_2.00
Homo sapiens
NHNCACCTDRV
BYHAGGTGNDN
Transfac
Matys et al.(2006)
V$DELTAEF1_01
0.824
0.824
ZEB1
M10094_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZEB1_03
0.824
0.824
ZEB1
M10095_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZEB_Q3
0.824
0.824
Zeb1
M05844_2.00
Mus musculus
NYACCTGN
NCAGGTRN
SMiLE-seq
Isakova et al.(2017)
ZEB1
0.819
0.819
Zeb1
M08849_2.00
Mus musculus
YHYACCTGBV
BVCAGGTRDR
Misc
Kulakovskiy et al.(2013)
ZEB1_MOUSE.H11MO.0.B
0.819
0.819
ZEB2
M10096_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SIP1_Q6
0.779
0.779
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSXMAP00000006021
C2H2 ZF
138
161
HICPYCSRGYKRNASLKEHIKYRH
ENSXMAP00000006021
C2H2 ZF
168
190
YSCSQCSYTFTYRSQLERHMSHH
ENSXMAP00000006021
C2H2 ZF
215
237
FKCTECSKAFKYKHHLKEHLRIH
ENSXMAP00000006021
C2H2 ZF
243
264
YECSNCKKRFSHSGSYSSHISS
ENSXMAP00000006021
Homeodomain
548
592
PPVEDLLSLLKTYFASNANPGEEELTKISKSVNIPMEVVKKWFIK
ENSXMAP00000006021
C2H2 ZF
816
838
YPCDLCSKVFQKGSSLLRHKYEH
ENSXMAP00000006021
C2H2 ZF
844
866
HECTICNKAFKHKHHLIEHSRLH
ENSXMAP00000006021
C2H2 ZF
872
893
YQCDKCGKRFSHSGSYSQHMNH
Links
Other
C2H2 ZF,Homeodomain
family TFs
Other
Xiphophorus maculatus
TFs
117 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSPFOG00000014086
Poecilia formosa
ENSPFOG00000014086
I
0.995
ENSPFOG00000014121
Poecilia formosa
ENSPFOG00000014121
I
0.990
ENSONIG00000015066
Oreochromis niloticus
ENSONIG00000015066
I
0.926
zeb1a
Tetraodon nigroviridis
ENSTNIG00000007962
I
0.922
zeb1a
Gasterosteus aculeatus
ENSGACG00000017648
I
0.892
ENSLACG00000013253
Latimeria chalumnae
ENSLACG00000013253
I
0.833
zeb1b
Danio rerio
ENSDARG00000013207
I
0.833
Zeb1
Rattus norvegicus
ENSRNOG00000017863
I
0.828
ENSLOCG00000007239
Lepisosteus oculatus
ENSLOCG00000007239
I
0.828
ZEB1
Pteropus vampyrus
ENSPVAG00000010088
I
0.824
ENSNLEG00000018130
Nomascus leucogenys
ENSNLEG00000018130
I
0.824
ZEB1
Sorex araneus
ENSSARG00000010985
I
0.824
ZEB1
Homo sapiens
ENSG00000148516
D
0.824
ZEB1
Pan troglodytes
ENSPTRG00000002404
I
0.824
ENSPPYG00000002189
Pongo abelii
ENSPPYG00000002189
I
0.824
ZEB1
Monodelphis domestica
ENSMODG00000007847
I
0.824
ENSMPUG00000013033
Mustela putorius furo
ENSMPUG00000013033
I
0.824
ZEB1
Otolemur garnettii
ENSOGAG00000008365
I
0.824
ZEB1
Macaca mulatta
ENSMMUG00000015453
I
0.824
ENSPANG00000022899
Papio anubis
ENSPANG00000022899
I
0.824
ZEB1
Gorilla gorilla
ENSGGOG00000010090
I
0.824
ENSSHAG00000005352
Sarcophilus harrisii
ENSSHAG00000005352
I
0.824
ENSPSIG00000009469
Pelodiscus sinensis
ENSPSIG00000009469
I
0.824
ZEB1
Felis catus
ENSFCAG00000010440
I
0.824
Cmyd_10008652
Chelonia mydas
Cmyd_10008652
I
0.824
Alligator_sinensis_CCG010397.1
Alligator sinensis
Alligator_sinensis_CCG010397.1
I
0.824
ENSP00000319248
Macaca fascicularis
ENSP00000319248
I
0.824
ZEB1
Bos taurus
ENSBTAG00000020053
I
0.824
ENSAMEG00000010224
Ailuropoda melanoleuca
ENSAMEG00000010224
I
0.824
Myotis_brandtii_ZEB1_10033015
Myotis brandtii
Myotis_brandtii_ZEB1_10033015
I
0.824
ZEB1
Callithrix jacchus
ENSCJAG00000013332
I
0.824
ZEB1
Canis familiaris
ENSCAFG00000004023
I
0.824
Zeb1
Dipodomys ordii
ENSDORG00000007230
I
0.824
ZEB1
Dasypus novemcinctus
ENSDNOG00000016748
I
0.824
ENSCSAG00000011628
Chlorocebus sabaeus
ENSCSAG00000011628
I
0.824
ENSSTOG00000016404
Ictidomys tridecemlineatus
ENSSTOG00000016404
I
0.824
Zeb1
Mus musculus
ENSMUSG00000024238
D
0.819
ZEB1
Anolis carolinensis
ENSACAG00000007353
I
0.819
ENSAPLG00000007482
Anas platyrhynchos
ENSAPLG00000007482
I
0.819
Tal_R009077
Tyto alba
Tal_R009077
I
0.819
ZEB1
Gallus gallus
ENSGALG00000007260
I
0.819
Gfo_R014876
Geospiza fortis
Gfo_R014876
I
0.819
Aan_R013683
Calypte anna
Aan_R013683
I
0.819
Afo_R009258
Aptenodytes forsteri
Afo_R009258
I
0.819
ENSFALG00000007118
Ficedula albicollis
ENSFALG00000007118
I
0.819
ZEB1
Takifugu rubripes
ENSTRUG00000001256
N
0.819
ABC48601
Xenopus laevis
ABC48601
I
0.814
ZEB1
Meleagris gallopavo
ENSMGAG00000006355
I
0.814
zeb1b
Oryzias latipes
ENSORLG00000004296
I
0.814
zeb1
Xenopus tropicalis
XB-GENE-484655
I
0.809
ENSPFOG00000013823
Poecilia formosa
ENSPFOG00000013823
I
0.809
ZEB1
Loxodonta africana
ENSLAFG00000009663
I
0.807
ENSXMAG00000005475
Xiphophorus maculatus
ENSXMAG00000005475
I
0.804
ENSONIG00000003766
Oreochromis niloticus
ENSONIG00000003766
I
0.804
zeb1.S
Xenopus laevis
XB-GENE-865109
I
0.799
ZEB1
Taeniopygia guttata
ENSTGUG00000001020
I
0.793
ENSGMOG00000010266
Gadus morhua
ENSGMOG00000010266
I
0.784
ZEB2
Tursiops truncatus
ENSTTRG00000006478
I
0.779
ZEB2
Vicugna pacos
ENSVPAG00000002128
I
0.779
ENSNLEG00000009020
Nomascus leucogenys
ENSNLEG00000009020
I
0.779
ENSCSAG00000016197
Chlorocebus sabaeus
ENSCSAG00000016197
I
0.779
ENSSTOG00000003811
Ictidomys tridecemlineatus
ENSSTOG00000003811
I
0.779
ZEB2
Equus caballus
ENSECAG00000019355
I
0.779
ENSSHAG00000016692
Sarcophilus harrisii
ENSSHAG00000016692
I
0.779
ZEB2
Dasypus novemcinctus
ENSDNOG00000039558
I
0.779
Myotis_brandtii_ZEB2_10007070
Myotis brandtii
Myotis_brandtii_ZEB2_10007070
I
0.779
ZEB2
Bos taurus
ENSBTAG00000012615
I
0.779
ZEB2
Choloepus hoffmanni
ENSCHOG00000001435
I
0.779
ENSBTAP00000053646-D1
Bos grunniens
ENSBTAP00000053646-D1
I
0.779
ZEB2
Canis familiaris
ENSCAFG00000005497
I
0.779
Alligator_sinensis_CCG017701.1
Alligator sinensis
Alligator_sinensis_CCG017701.1
I
0.779
ZEB2
Callithrix jacchus
ENSCJAG00000012457
I
0.779
XP_002936763
Xenopus tropicalis
XP_002936763
I
0.779
ENSAPLG00000007687
Anas platyrhynchos
ENSAPLG00000007687
I
0.779
ZEB2
Cavia porcellus
ENSCPOG00000004182
I
0.779
ENSP00000386854
Macaca fascicularis
ENSP00000386854
I
0.779
ZEB2
Felis catus
ENSFCAG00000015532
I
0.779
ZEB2
Myotis lucifugus
ENSMLUG00000002019
I
0.779
ZEB2
Meleagris gallopavo
ENSMGAG00000012628
I
0.779
ZEB2
Homo sapiens
ENSG00000169554
D
0.779
ZEB2
Loxodonta africana
ENSLAFG00000008960
I
0.779
XP_002936766
Xenopus tropicalis
XP_002936766
I
0.779
ENSPANG00000008399
Papio anubis
ENSPANG00000008399
I
0.779
ZEB2
Monodelphis domestica
ENSMODG00000003112
I
0.779
ZEB2
Ochotona princeps
ENSOPRG00000006205
I
0.779
ZEB2
Macaca mulatta
ENSMMUG00000016845
I
0.779
ZEB2
Otolemur garnettii
ENSOGAG00000010020
I
0.779
Zeb2
Mus musculus
ENSMUSG00000026872
I
0.779
ENSAMEG00000009337
Ailuropoda melanoleuca
ENSAMEG00000009337
I
0.779
Zeb2
Rattus norvegicus
ENSRNOG00000004677
I
0.779
ZEB2
Oryctolagus cuniculus
ENSOCUG00000027880
I
0.779
ZEB2
Pan troglodytes
ENSPTRG00000012513
I
0.779
ENSGALG00000012440
Gallus gallus
ENSGALG00000012440
I
0.779
ENSPPYG00000012831
Pongo abelii
ENSPPYG00000012831
I
0.779
ZEB2
Gorilla gorilla
ENSGGOG00000003186
I
0.779
zeb2
Xenopus tropicalis
XB-GENE-479558
I
0.779
ENSMPUG00000003620
Mustela putorius furo
ENSMPUG00000003620
I
0.779
Gfo_R001123
Geospiza fortis
Gfo_R001123
I
0.775
Ogr14261
Ophisaurus gracilis
Ogr14261
I
0.775
zeb2.S
Xenopus laevis
XB-GENE-865280
I
0.775
Pvit_13221
Pogona vitticeps
Pvit_13221
I
0.775
ZEB2
Anolis carolinensis
ENSACAG00000023811
I
0.775
ZEB2
Taeniopygia guttata
ENSTGUG00000011904
I
0.775
ENSFALG00000013846
Ficedula albicollis
ENSFALG00000013846
I
0.775
zeb1b
Gasterosteus aculeatus
ENSGACG00000001002
I
0.775
Cmyd_10013008
Chelonia mydas
Cmyd_10013008
I
0.775
Aan_R003058
Calypte anna
Aan_R003058
I
0.775
Afo_R000542
Aptenodytes forsteri
Afo_R000542
I
0.775
ENSPSIG00000016788
Pelodiscus sinensis
ENSPSIG00000016788
I
0.775
Brh_R003547
Buceros rhinoceros
Brh_R003547
I
0.775
ENSPFOG00000016296
Poecilia formosa
ENSPFOG00000016296
I
0.765
ENSXMAG00000002123
Xiphophorus maculatus
ENSXMAG00000002123
I
0.765
zeb1b
Takifugu rubripes
ENSTRUG00000001422
I
0.765
zeb1a
Danio rerio
ENSDARG00000016788
I
0.755
ENSAMXG00000010069
Astyanax mexicanus
ENSAMXG00000010069
I
0.748
ZEB1
Myotis lucifugus
ENSMLUG00000010631
I
0.701
ZEB1
Cavia porcellus
ENSCPOG00000007682
I
0.701