Cmyd_10013008 (Chelonia mydas)
C2H2 ZF,Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2)
PF00046 (Homeobox) 		IPR007087
IPR001356 		Cmyd_10013008 T076230_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZEB2
M10096_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIP1_Q6 		0.990 0.990
ZEB1
M08080_2.00 		Homo sapiens
NNCACCTGBNN
NNVCAGGTGNN		 ChIP-seq
Mathelier et al.(2014)
MA0103.3 		0.828 0.828
ZEB1
M07842_2.00 		Homo sapiens
YNCACCTG
CAGGTGNR		 ChIP-seq
Gerstein et al.(2012)
GM12878_ZEB1_HudsonAlpha 		0.828 0.828
ZEB1
M08190_2.00 		Homo sapiens
CVCWCACCTG
CAGGTGWGBG		 ChIP-seq
Contrino et al.(2012)
Mv136 		0.828 0.828
ZEB1
M08848_2.00 		Homo sapiens
YHYACCTGBV
BVCAGGTRDR		 Misc
Kulakovskiy et al.(2013)
ZEB1_HUMAN.H11MO.0.A 		0.828 0.828
ZEB1
M10089_2.00 		Homo sapiens
NHYDYACCTGWVY
RBWCAGGTRHRDN		 Transfac
Matys et al.(2006)
V$AREB6_01 		0.828 0.828
ZEB1
M10090_2.00 		Homo sapiens
WHWCACCTKWNN
NNWMAGGTGWDW		 Transfac
Matys et al.(2006)
V$AREB6_02 		0.828 0.828
ZEB1
M10091_2.00 		Homo sapiens
VBRCACCTGKDV
BHMCAGGTGYVB		 Transfac
Matys et al.(2006)
V$AREB6_03 		0.828 0.828
ZEB1
M10092_2.00 		Homo sapiens
NNSAAACVB
VBGTTTSNN		 Transfac
Matys et al.(2006)
V$AREB6_04 		0.828 0.828
ZEB1
M10093_2.00 		Homo sapiens
NHNCACCTDRV
BYHAGGTGNDN		 Transfac
Matys et al.(2006)
V$DELTAEF1_01 		0.828 0.828
ZEB1
M10094_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZEB1_03 		0.828 0.828
ZEB1
M10095_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZEB_Q3 		0.828 0.828
Zeb1
M05844_2.00 		Mus musculus
NYACCTGN
NCAGGTRN		 SMiLE-seq
Isakova et al.(2017)
ZEB1 		0.823 0.823
Zeb1
M08849_2.00 		Mus musculus
YHYACCTGBV
BVCAGGTRDR		 Misc
Kulakovskiy et al.(2013)
ZEB1_MOUSE.H11MO.0.B 		0.823 0.823
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cmyd_10013008 C2H2 ZF 124 147
Cmyd_10013008 C2H2 ZF 154 176
Cmyd_10013008 C2H2 ZF 195 217
Cmyd_10013008 C2H2 ZF 223 244
Cmyd_10013008 Homeodomain 563 612
Cmyd_10013008 C2H2 ZF 912 934
Cmyd_10013008 C2H2 ZF 940 962
Cmyd_10013008 C2H2 ZF 968 989

Links

Other C2H2 ZF,Homeodomain family TFs
Other Chelonia mydas TFs

125 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSPSIG00000016788 Pelodiscus sinensis ENSPSIG00000016788 I 0.995
Zeb2 Mus musculus ENSMUSG00000026872 I 0.990
ENSMPUG00000003620 Mustela putorius furo ENSMPUG00000003620 I 0.990
ENSNLEG00000009020 Nomascus leucogenys ENSNLEG00000009020 I 0.990
ZEB2 Oryctolagus cuniculus ENSOCUG00000027880 I 0.990
ENSPANG00000008399 Papio anubis ENSPANG00000008399 I 0.990
ZEB2 Otolemur garnettii ENSOGAG00000010020 I 0.990
ZEB2 Monodelphis domestica ENSMODG00000003112 I 0.990
ZEB2 Macaca mulatta ENSMMUG00000016845 I 0.990
ZEB2 Gorilla gorilla ENSGGOG00000003186 I 0.990
ENSGALG00000012440 Gallus gallus ENSGALG00000012440 I 0.990
ZEB2 Loxodonta africana ENSLAFG00000008960 I 0.990
ZEB2 Meleagris gallopavo ENSMGAG00000012628 I 0.990
ZEB2 Myotis lucifugus ENSMLUG00000002019 I 0.990
ENSPPYG00000012831 Pongo abelii ENSPPYG00000012831 I 0.990
ZEB2 Homo sapiens ENSG00000169554 D 0.990
ENSP00000386854 Macaca fascicularis ENSP00000386854 I 0.990
ENSBTAP00000053646-D1 Bos grunniens ENSBTAP00000053646-D1 I 0.990
Myotis_brandtii_ZEB2_10007070 Myotis brandtii Myotis_brandtii_ZEB2_10007070 I 0.990
zeb2 Xenopus tropicalis XB-GENE-479558 I 0.990
XP_002936763 Xenopus tropicalis XP_002936763 I 0.990
Alligator_sinensis_CCG017701.1 Alligator sinensis Alligator_sinensis_CCG017701.1 I 0.990
ZEB2 Vicugna pacos ENSVPAG00000002128 I 0.990
Zeb2 Rattus norvegicus ENSRNOG00000004677 I 0.990
ZEB2 Pan troglodytes ENSPTRG00000012513 I 0.990
ENSSHAG00000016692 Sarcophilus harrisii ENSSHAG00000016692 I 0.990
ENSSTOG00000003811 Ictidomys tridecemlineatus ENSSTOG00000003811 I 0.990
ZEB2 Tursiops truncatus ENSTTRG00000006478 I 0.990
XP_002936766 Xenopus tropicalis XP_002936766 I 0.990
ZEB2 Ochotona princeps ENSOPRG00000006205 I 0.990
ENSCSAG00000016197 Chlorocebus sabaeus ENSCSAG00000016197 I 0.990
ZEB2 Dasypus novemcinctus ENSDNOG00000039558 I 0.990
ZEB2 Equus caballus ENSECAG00000019355 I 0.990
ZEB2 Canis familiaris ENSCAFG00000005497 I 0.990
ZEB2 Choloepus hoffmanni ENSCHOG00000001435 I 0.990
ZEB2 Cavia porcellus ENSCPOG00000004182 I 0.990
ZEB2 Callithrix jacchus ENSCJAG00000012457 I 0.990
ENSAPLG00000007687 Anas platyrhynchos ENSAPLG00000007687 I 0.990
ZEB2 Bos taurus ENSBTAG00000012615 I 0.990
ENSAMEG00000009337 Ailuropoda melanoleuca ENSAMEG00000009337 I 0.990
ZEB2 Felis catus ENSFCAG00000015532 I 0.990
Aan_R003058 Calypte anna Aan_R003058 I 0.986
zeb2.S Xenopus laevis XB-GENE-865280 I 0.986
ENSFALG00000013846 Ficedula albicollis ENSFALG00000013846 I 0.986
Afo_R000542 Aptenodytes forsteri Afo_R000542 I 0.986
ZEB2 Taeniopygia guttata ENSTGUG00000011904 I 0.986
Gfo_R001123 Geospiza fortis Gfo_R001123 I 0.986
Brh_R003547 Buceros rhinoceros Brh_R003547 I 0.986
Pvit_13221 Pogona vitticeps Pvit_13221 I 0.971
Ogr14261 Ophisaurus gracilis Ogr14261 I 0.971
ZEB2 Anolis carolinensis ENSACAG00000023811 I 0.971
ENSGMOG00000010266 Gadus morhua ENSGMOG00000010266 I 0.895
ENSPFOG00000016296 Poecilia formosa ENSPFOG00000016296 I 0.871
ENSXMAG00000002123 Xiphophorus maculatus ENSXMAG00000002123 I 0.854
ENSLACG00000013253 Latimeria chalumnae ENSLACG00000013253 I 0.833
ENSSHAG00000005352 Sarcophilus harrisii ENSSHAG00000005352 I 0.833
ZEB1 Loxodonta africana ENSLAFG00000009663 I 0.831
ZEB1 Callithrix jacchus ENSCJAG00000013332 I 0.828
ZEB1 Pan troglodytes ENSPTRG00000002404 I 0.828
ENSPPYG00000002189 Pongo abelii ENSPPYG00000002189 I 0.828
ENSPSIG00000009469 Pelodiscus sinensis ENSPSIG00000009469 I 0.828
Myotis_brandtii_ZEB1_10033015 Myotis brandtii Myotis_brandtii_ZEB1_10033015 I 0.828
ENSP00000319248 Macaca fascicularis ENSP00000319248 I 0.828
Cmyd_10008652 Chelonia mydas Cmyd_10008652 I 0.828
ZEB1 Canis familiaris ENSCAFG00000004023 I 0.828
ZEB1 Bos taurus ENSBTAG00000020053 I 0.828
Alligator_sinensis_CCG010397.1 Alligator sinensis Alligator_sinensis_CCG010397.1 I 0.828
ENSSTOG00000016404 Ictidomys tridecemlineatus ENSSTOG00000016404 I 0.828
ENSAMEG00000010224 Ailuropoda melanoleuca ENSAMEG00000010224 I 0.828
ZEB1 Sorex araneus ENSSARG00000010985 I 0.828
ZEB1 Pteropus vampyrus ENSPVAG00000010088 I 0.828
ENSCSAG00000011628 Chlorocebus sabaeus ENSCSAG00000011628 I 0.828
ZEB1 Gorilla gorilla ENSGGOG00000010090 I 0.828
ZEB1 Dasypus novemcinctus ENSDNOG00000016748 I 0.828
ENSMPUG00000013033 Mustela putorius furo ENSMPUG00000013033 I 0.828
ZEB1 Felis catus ENSFCAG00000010440 I 0.828
ZEB1 Otolemur garnettii ENSOGAG00000008365 I 0.828
ZEB1 Monodelphis domestica ENSMODG00000007847 I 0.828
ENSNLEG00000018130 Nomascus leucogenys ENSNLEG00000018130 I 0.828
ENSPANG00000022899 Papio anubis ENSPANG00000022899 I 0.828
ZEB1 Homo sapiens ENSG00000148516 D 0.828
ZEB1 Macaca mulatta ENSMMUG00000015453 I 0.828
Zeb1 Dipodomys ordii ENSDORG00000007230 I 0.828
ENSLOCG00000007239 Lepisosteus oculatus ENSLOCG00000007239 I 0.823
Aan_R013683 Calypte anna Aan_R013683 I 0.823
ZEB1 Anolis carolinensis ENSACAG00000007353 I 0.823
Afo_R009258 Aptenodytes forsteri Afo_R009258 I 0.823
Zeb1 Rattus norvegicus ENSRNOG00000017863 I 0.823
ZEB1 Gallus gallus ENSGALG00000007260 I 0.823
Zeb1 Mus musculus ENSMUSG00000024238 D 0.823
ENSAPLG00000007482 Anas platyrhynchos ENSAPLG00000007482 I 0.823
Tal_R009077 Tyto alba Tal_R009077 I 0.823
ZEB1 Meleagris gallopavo ENSMGAG00000006355 I 0.818
Gfo_R014876 Geospiza fortis Gfo_R014876 I 0.818
ENSFALG00000007118 Ficedula albicollis ENSFALG00000007118 I 0.818
zeb1b Danio rerio ENSDARG00000013207 I 0.818
ZEB1 Taeniopygia guttata ENSTGUG00000001020 I 0.817
zeb1 Xenopus tropicalis XB-GENE-484655 I 0.813
ENSPFOG00000013823 Poecilia formosa ENSPFOG00000013823 I 0.808
zeb1.S Xenopus laevis XB-GENE-865109 I 0.804
zeb1b Oryzias latipes ENSORLG00000004296 I 0.804
ENSXMAG00000005475 Xiphophorus maculatus ENSXMAG00000005475 I 0.799
ENSONIG00000003766 Oreochromis niloticus ENSONIG00000003766 I 0.799
ABC48601 Xenopus laevis ABC48601 I 0.799
zeb1a Tetraodon nigroviridis ENSTNIG00000007962 I 0.783
ENSMEUG00000008997 Macropus eugenii ENSMEUG00000008997 I 0.775
ENSXMAG00000006005 Xiphophorus maculatus ENSXMAG00000006005 I 0.775
ZEB2 Sorex araneus ENSSARG00000006858 I 0.775
ENSPFOG00000014086 Poecilia formosa ENSPFOG00000014086 I 0.775
ENSOARG00000009880 Ovis aries ENSOARG00000009880 I 0.775
zeb1b Gasterosteus aculeatus ENSGACG00000001002 I 0.770
ZEB2 Tupaia belangeri ENSTBEG00000013983 I 0.770
Tal_R007044 Tyto alba Tal_R007044 I 0.770
ENSONIG00000015066 Oreochromis niloticus ENSONIG00000015066 I 0.765
zeb1b Takifugu rubripes ENSTRUG00000001422 I 0.761
ZEB2 Pteropus vampyrus ENSPVAG00000015557 I 0.761
ENSPFOG00000014121 Poecilia formosa ENSPFOG00000014121 I 0.756
ENSAMXG00000010069 Astyanax mexicanus ENSAMXG00000010069 I 0.748
XP_002936765 Xenopus tropicalis XP_002936765 I 0.732
ZEB2 Procavia capensis ENSPCAG00000014674 I 0.732
ENSTSYG00000009434 Tarsius syrichta ENSTSYG00000009434 I 0.732
zeb1a Gasterosteus aculeatus ENSGACG00000017648 I 0.727
zeb1a Danio rerio ENSDARG00000016788 I 0.722
ZEB1 Cavia porcellus ENSCPOG00000007682 I 0.708
ZEB1 Myotis lucifugus ENSMLUG00000010631 I 0.708