zeb1 (Xenopus tropicalis)
C2H2 ZF,Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2)
PF00046 (Homeobox) 		IPR007087
IPR001356 		XB-GENE-484655 T076295_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZEB1
M08080_2.00 		Homo sapiens
NNCACCTGBNN
NNVCAGGTGNN		 ChIP-seq
Mathelier et al.(2014)
MA0103.3 		0.971 0.971
ZEB1
M07842_2.00 		Homo sapiens
YNCACCTG
CAGGTGNR		 ChIP-seq
Gerstein et al.(2012)
GM12878_ZEB1_HudsonAlpha 		0.971 0.971
ZEB1
M08190_2.00 		Homo sapiens
CVCWCACCTG
CAGGTGWGBG		 ChIP-seq
Contrino et al.(2012)
Mv136 		0.971 0.971
ZEB1
M08848_2.00 		Homo sapiens
YHYACCTGBV
BVCAGGTRDR		 Misc
Kulakovskiy et al.(2013)
ZEB1_HUMAN.H11MO.0.A 		0.971 0.971
ZEB1
M10089_2.00 		Homo sapiens
NHYDYACCTGWVY
RBWCAGGTRHRDN		 Transfac
Matys et al.(2006)
V$AREB6_01 		0.971 0.971
ZEB1
M10090_2.00 		Homo sapiens
WHWCACCTKWNN
NNWMAGGTGWDW		 Transfac
Matys et al.(2006)
V$AREB6_02 		0.971 0.971
ZEB1
M10091_2.00 		Homo sapiens
VBRCACCTGKDV
BHMCAGGTGYVB		 Transfac
Matys et al.(2006)
V$AREB6_03 		0.971 0.971
ZEB1
M10092_2.00 		Homo sapiens
NNSAAACVB
VBGTTTSNN		 Transfac
Matys et al.(2006)
V$AREB6_04 		0.971 0.971
ZEB1
M10093_2.00 		Homo sapiens
NHNCACCTDRV
BYHAGGTGNDN		 Transfac
Matys et al.(2006)
V$DELTAEF1_01 		0.971 0.971
ZEB1
M10094_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZEB1_03 		0.971 0.971
ZEB1
M10095_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZEB_Q3 		0.971 0.971
Zeb1
M05844_2.00 		Mus musculus
NYACCTGN
NCAGGTRN		 SMiLE-seq
Isakova et al.(2017)
ZEB1 		0.966 0.966
Zeb1
M08849_2.00 		Mus musculus
YHYACCTGBV
BVCAGGTRDR		 Misc
Kulakovskiy et al.(2013)
ZEB1_MOUSE.H11MO.0.B 		0.966 0.966
ZEB2
M10096_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIP1_Q6 		0.830 0.830
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAH90088 C2H2 ZF 151 174
AAH90088 C2H2 ZF 181 203
AAH90088 C2H2 ZF 221 243
AAH90088 C2H2 ZF 249 270
AAH90088 Homeodomain 563 609
AAH90088 C2H2 ZF 873 895
AAH90088 C2H2 ZF 901 923
AAH90088 C2H2 ZF 929 950

Links

Other C2H2 ZF,Homeodomain family TFs
Other Xenopus tropicalis TFs

125 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
zeb1.S Xenopus laevis XB-GENE-865109 I 0.981
ABC48601 Xenopus laevis ABC48601 I 0.976
ZEB1 Sorex araneus ENSSARG00000010985 I 0.971
ZEB1 Monodelphis domestica ENSMODG00000007847 I 0.971
Myotis_brandtii_ZEB1_10033015 Myotis brandtii Myotis_brandtii_ZEB1_10033015 I 0.971
Afo_R009258 Aptenodytes forsteri Afo_R009258 I 0.966
ZEB1 Gallus gallus ENSGALG00000007260 I 0.966
Zeb1 Mus musculus ENSMUSG00000024238 D 0.966
Aan_R013683 Calypte anna Aan_R013683 I 0.966
ZEB1 Meleagris gallopavo ENSMGAG00000006355 I 0.966
Gfo_R014876 Geospiza fortis Gfo_R014876 I 0.966
ENSFALG00000007118 Ficedula albicollis ENSFALG00000007118 I 0.966
Tal_R009077 Tyto alba Tal_R009077 I 0.966
ENSAPLG00000007482 Anas platyrhynchos ENSAPLG00000007482 I 0.966
ENSPSIG00000009469 Pelodiscus sinensis ENSPSIG00000009469 I 0.962
ZEB1 Felis catus ENSFCAG00000010440 I 0.962
ZEB1 Homo sapiens ENSG00000148516 D 0.962
ZEB1 Pan troglodytes ENSPTRG00000002404 I 0.962
ENSNLEG00000018130 Nomascus leucogenys ENSNLEG00000018130 I 0.962
ZEB1 Gorilla gorilla ENSGGOG00000010090 I 0.962
ENSMPUG00000013033 Mustela putorius furo ENSMPUG00000013033 I 0.962
ZEB1 Pteropus vampyrus ENSPVAG00000010088 I 0.962
ZEB1 Otolemur garnettii ENSOGAG00000008365 I 0.962
ENSPANG00000022899 Papio anubis ENSPANG00000022899 I 0.962
ENSPPYG00000002189 Pongo abelii ENSPPYG00000002189 I 0.962
Zeb1 Dipodomys ordii ENSDORG00000007230 I 0.962
Cmyd_10008652 Chelonia mydas Cmyd_10008652 I 0.962
Alligator_sinensis_CCG010397.1 Alligator sinensis Alligator_sinensis_CCG010397.1 I 0.962
ENSP00000319248 Macaca fascicularis ENSP00000319248 I 0.962
ZEB1 Canis familiaris ENSCAFG00000004023 I 0.962
ENSAMEG00000010224 Ailuropoda melanoleuca ENSAMEG00000010224 I 0.962
ZEB1 Bos taurus ENSBTAG00000020053 I 0.962
ENSCSAG00000011628 Chlorocebus sabaeus ENSCSAG00000011628 I 0.962
ZEB1 Callithrix jacchus ENSCJAG00000013332 I 0.962
ZEB1 Dasypus novemcinctus ENSDNOG00000016748 I 0.962
ENSSTOG00000016404 Ictidomys tridecemlineatus ENSSTOG00000016404 I 0.962
ZEB1 Macaca mulatta ENSMMUG00000015453 I 0.962
ZEB1 Loxodonta africana ENSLAFG00000009663 I 0.961
Zeb1 Rattus norvegicus ENSRNOG00000017863 I 0.957
ZEB1 Taeniopygia guttata ENSTGUG00000001020 I 0.957
ENSSHAG00000005352 Sarcophilus harrisii ENSSHAG00000005352 I 0.952
ENSLACG00000013253 Latimeria chalumnae ENSLACG00000013253 I 0.952
ZEB1 Anolis carolinensis ENSACAG00000007353 I 0.952
ENSLOCG00000007239 Lepisosteus oculatus ENSLOCG00000007239 I 0.937
zeb1b Danio rerio ENSDARG00000013207 I 0.903
ENSONIG00000003766 Oreochromis niloticus ENSONIG00000003766 I 0.872
zeb1b Oryzias latipes ENSORLG00000004296 I 0.864
ENSXMAG00000005475 Xiphophorus maculatus ENSXMAG00000005475 I 0.859
ENSPFOG00000013823 Poecilia formosa ENSPFOG00000013823 I 0.851
ZEB1 Cavia porcellus ENSCPOG00000007682 I 0.850
ZEB1 Myotis lucifugus ENSMLUG00000010631 I 0.850
ZEB2 Vicugna pacos ENSVPAG00000002128 I 0.830
Zeb2 Rattus norvegicus ENSRNOG00000004677 I 0.830
ZEB2 Pan troglodytes ENSPTRG00000012513 I 0.830
ZEB2 Tursiops truncatus ENSTTRG00000006478 I 0.830
ZEB2 Equus caballus ENSECAG00000019355 I 0.830
ZEB2 Cavia porcellus ENSCPOG00000004182 I 0.830
ENSSTOG00000003811 Ictidomys tridecemlineatus ENSSTOG00000003811 I 0.830
ENSCSAG00000016197 Chlorocebus sabaeus ENSCSAG00000016197 I 0.830
ZEB2 Dasypus novemcinctus ENSDNOG00000039558 I 0.830
ZEB2 Callithrix jacchus ENSCJAG00000012457 I 0.830
ENSAMEG00000009337 Ailuropoda melanoleuca ENSAMEG00000009337 I 0.830
Myotis_brandtii_ZEB2_10007070 Myotis brandtii Myotis_brandtii_ZEB2_10007070 I 0.830
zeb2 Xenopus tropicalis XB-GENE-479558 I 0.830
XP_002936763 Xenopus tropicalis XP_002936763 I 0.830
XP_002936766 Xenopus tropicalis XP_002936766 I 0.830
ENSAPLG00000007687 Anas platyrhynchos ENSAPLG00000007687 I 0.830
ZEB2 Bos taurus ENSBTAG00000012615 I 0.830
ZEB2 Choloepus hoffmanni ENSCHOG00000001435 I 0.830
Alligator_sinensis_CCG017701.1 Alligator sinensis Alligator_sinensis_CCG017701.1 I 0.830
ENSBTAP00000053646-D1 Bos grunniens ENSBTAP00000053646-D1 I 0.830
ZEB2 Canis familiaris ENSCAFG00000005497 I 0.830
ENSP00000386854 Macaca fascicularis ENSP00000386854 I 0.830
ZEB2 Felis catus ENSFCAG00000015532 I 0.830
ENSSHAG00000016692 Sarcophilus harrisii ENSSHAG00000016692 I 0.830
ZEB2 Ochotona princeps ENSOPRG00000006205 I 0.830
ENSNLEG00000009020 Nomascus leucogenys ENSNLEG00000009020 I 0.830
Zeb2 Mus musculus ENSMUSG00000026872 I 0.830
ENSPANG00000008399 Papio anubis ENSPANG00000008399 I 0.830
ZEB2 Gorilla gorilla ENSGGOG00000003186 I 0.830
ZEB2 Oryctolagus cuniculus ENSOCUG00000027880 I 0.830
ZEB2 Otolemur garnettii ENSOGAG00000010020 I 0.830
ENSPPYG00000012831 Pongo abelii ENSPPYG00000012831 I 0.830
ENSGALG00000012440 Gallus gallus ENSGALG00000012440 I 0.830
zeb1b Gasterosteus aculeatus ENSGACG00000001002 I 0.830
ZEB2 Loxodonta africana ENSLAFG00000008960 I 0.830
ENSMPUG00000003620 Mustela putorius furo ENSMPUG00000003620 I 0.830
ZEB2 Macaca mulatta ENSMMUG00000016845 I 0.830
ZEB2 Homo sapiens ENSG00000169554 D 0.830
ZEB2 Myotis lucifugus ENSMLUG00000002019 I 0.830
ZEB2 Meleagris gallopavo ENSMGAG00000012628 I 0.830
ZEB2 Monodelphis domestica ENSMODG00000003112 I 0.830
ENSPSIG00000016788 Pelodiscus sinensis ENSPSIG00000016788 I 0.825
Ogr14261 Ophisaurus gracilis Ogr14261 I 0.816
Pvit_13221 Pogona vitticeps Pvit_13221 I 0.816
ZEB2 Anolis carolinensis ENSACAG00000023811 I 0.816
Cmyd_10013008 Chelonia mydas Cmyd_10013008 I 0.813
zeb1b Takifugu rubripes ENSTRUG00000001422 I 0.811
Afo_R000542 Aptenodytes forsteri Afo_R000542 I 0.810
Brh_R003547 Buceros rhinoceros Brh_R003547 I 0.810
Gfo_R001123 Geospiza fortis Gfo_R001123 I 0.810
Aan_R003058 Calypte anna Aan_R003058 I 0.810
ZEB2 Taeniopygia guttata ENSTGUG00000011904 I 0.810
ENSFALG00000013846 Ficedula albicollis ENSFALG00000013846 I 0.810
ENSPFOG00000014121 Poecilia formosa ENSPFOG00000014121 I 0.809
ENSXMAG00000006005 Xiphophorus maculatus ENSXMAG00000006005 I 0.809
ENSPFOG00000014086 Poecilia formosa ENSPFOG00000014086 I 0.809
ENSONIG00000015066 Oreochromis niloticus ENSONIG00000015066 I 0.809
zeb2.S Xenopus laevis XB-GENE-865280 I 0.805
zeb1a Tetraodon nigroviridis ENSTNIG00000007962 I 0.798
ENSAMXG00000010069 Astyanax mexicanus ENSAMXG00000010069 I 0.796
ENSGMOG00000010266 Gadus morhua ENSGMOG00000010266 I 0.786
ENSPFOG00000016296 Poecilia formosa ENSPFOG00000016296 I 0.782
zeb1a Gasterosteus aculeatus ENSGACG00000017648 I 0.772
zeb1a Danio rerio ENSDARG00000016788 I 0.763
ENSXMAG00000002123 Xiphophorus maculatus ENSXMAG00000002123 I 0.761
ENSOARG00000013971 Ovis aries ENSOARG00000013971 I 0.757
ZEB1 Procavia capensis ENSPCAG00000004425 I 0.757
ZEB1 Equus caballus ENSECAG00000020102 I 0.757
ZEB1 Tursiops truncatus ENSTTRG00000011798 I 0.752
ZEB1 Oryctolagus cuniculus ENSOCUG00000006516 I 0.752
Pvit_04101 Pogona vitticeps Pvit_04101 I 0.752
ZEB2 Pteropus vampyrus ENSPVAG00000015557 I 0.750
ZEB1 Erinaceus europaeus ENSEEUG00000006386 I 0.743
ENSTSYG00000009177 Tarsius syrichta ENSTSYG00000009177 I 0.714