CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
RSKR_0000829000
(
Rhabditophanes kr3021
)
C2H2 ZF,Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
PF00046 (Homeobox)
IPR007087
IPR001356
RSKR_0000829000
T076401_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
RSKR_0000829000.1
Homeodomain
132
188
LRSRSFLSDTQVATLYNQFKKNKFPSKYELSALAEQIGVNKRVVQVWFQNKRAMERR
RSKR_0000829000.1
C2H2 ZF
426
448
FACDQCEKTFGKQSSLARHKYEH
RSKR_0000829000.1
C2H2 ZF
454
476
YKCDVCEKAFKHKHHLTEHKRLH
RSKR_0000829000.1
C2H2 ZF
482
503
FQCDKCLKRFSHSGSYSQHMNH
Links
Other
C2H2 ZF,Homeodomain
family TFs
Other
Rhabditophanes kr3021
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bm3681
Brugia malayi
Bm3681
N
0.888
TELCIR_15558
Teladorsagia circumcincta
TELCIR_15558
N
0.888
nLs.2.1.2.g09067
Litomosoides sigmodontis
nLs.2.1.2.g09067
N
0.888
nOo.2.0.1.g04264
Onchocerca ochengi
nOo.2.0.1.g04264
N
0.888
GPLIN_000168700
Globodera pallida
GPLIN_000168700
N
0.784
HCOI00581300
Haemonchus contortus
HCOI00581300
N
0.755
WBGene00241636
Onchocerca volvulus
WBGene00241636
N
0.755
SSTP_0000865200
Strongyloides stercoralis
SSTP_0000865200
N
0.718
PTRK_0001785400
Parastrongyloides trichosuri
PTRK_0001785400
N
0.718
SPAL_0000385600
Strongyloides papillosus
SPAL_0000385600
N
0.712
SVE_1904900
Strongyloides venezuelensis
SVE_1904900
N
0.712