CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Zkscan2
(
Mus musculus
)
C2H2 ZF,MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
PF10545 (MADF_DNA_bdg)
IPR007087
IPR006578
ENSMUSG00000030757
T076469_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZKSCAN2
M07562_2.00
Homo sapiens
RRRRRMMAC
GTKTYYYYY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZKSCAN2.RCADE.ReprocessedData
0.947
0.947
ZSCAN29
M04384_2.00
Homo sapiens
MCGYRTARMCGKCTAYRCNN
NNGYRTAGMCGKYTAYRCGK
SELEX
Yin et al.(2017)
ZSCAN29_eDBD_HT-SELEX
0.733
0.733
ZSCAN29
M08271_2.00
Homo sapiens
YGTCTACRCNGN
NCNGYGTAGACR
ChIP-seq
Schmitges et al.(2016)
Q8IWY8_1-4.RCADE
0.733
0.733
ZSCAN29
M04385_2.00
Homo sapiens
MHGYRTAGMCGKCTACACNN
NNGTGTAGMCGKCTAYRCDK
SELEX
Yin et al.(2017)
ZSCAN29_eDBD_Methyl-HT-SELEX
0.733
0.733
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMUSP00000041821
MADF
355
416
YETLQACPRNSQVYGAVAEWLRECGFLRTPEQCRTKFKSLQKSYRKVRNGHMLEPCAFFEDM
ENSMUSP00000041821
MADF
508
575
TRFYEALQACHRKSKLYGVVAEQLRECGFLRTPEQCRTKFKSLQKSYRKVKNGHVLESCAFYKEMDAL
ENSMUSP00000041821
C2H2 ZF
768
790
FKCGVCGKCFGRSRSLIRHQRIH
ENSMUSP00000041821
C2H2 ZF
796
818
FKCPDCGKSFNDSSNFGAHQRVH
ENSMUSP00000041821
C2H2 ZF
824
846
YRCRECGKCFSQSSSLIIHQRTH
ENSMUSP00000041821
C2H2 ZF
852
874
YQCEECGKSFTNSSHFSAHRRIH
ENSMUSP00000041821
C2H2 ZF
880
902
YKCGDCEKSFNNCARFREHQRIH
ENSMUSP00000041821
C2H2 ZF
908
930
YTCAQCGKHFNKSSFLTKHREVH
Links
Other
C2H2 ZF,MADF
family TFs
Other
Mus musculus
TFs
61 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Zkscan2
Rattus norvegicus
ENSRNOG00000024245
I
0.969
ZKSCAN2
Homo sapiens
ENSG00000155592
D
0.947
ZKSCAN2
Pan troglodytes
ENSPTRG00000007906
I
0.947
ENSPPYG00000007207
Pongo abelii
ENSPPYG00000007207
I
0.947
ENSCSAG00000006472
Chlorocebus sabaeus
ENSCSAG00000006472
I
0.943
ENSPANG00000007624
Papio anubis
ENSPANG00000007624
I
0.943
ENSNLEG00000011727
Nomascus leucogenys
ENSNLEG00000011727
I
0.943
ENSMICG00000001583
Microcebus murinus
ENSMICG00000001583
I
0.943
ENSP00000331626
Macaca fascicularis
ENSP00000331626
I
0.943
ZKSCAN2
Canis familiaris
ENSCAFG00000017477
I
0.939
ENSTSYG00000009836
Tarsius syrichta
ENSTSYG00000009836
I
0.939
ENSSTOG00000000417
Ictidomys tridecemlineatus
ENSSTOG00000000417
I
0.939
ZKSCAN2
Callithrix jacchus
ENSCJAG00000020749
I
0.939
ZKSCAN2
Gorilla gorilla
ENSGGOG00000004769
I
0.939
ZKSCAN2
Sus scrofa
ENSSSCG00000007823
I
0.935
ENSAMEG00000006980
Ailuropoda melanoleuca
ENSAMEG00000006980
I
0.935
ZKSCAN2
Dasypus novemcinctus
ENSDNOG00000044830
I
0.935
ENSSSCG00000007824
Sus scrofa
ENSSSCG00000007824
I
0.932
ZKSCAN2
Loxodonta africana
ENSLAFG00000007287
I
0.931
ZKSCAN2
Choloepus hoffmanni
ENSCHOG00000013904
I
0.931
ZKSCAN2
Tursiops truncatus
ENSTTRG00000015263
I
0.927
ZKSCAN2
Procavia capensis
ENSPCAG00000014144
I
0.920
ENSCPOG00000005222
Cavia porcellus
ENSCPOG00000005222
I
0.920
ZKSCAN2
Sorex araneus
ENSSARG00000003883
I
0.916
ZKSCAN2
Bos taurus
ENSBTAG00000011162
I
0.901
ENSOARG00000018575
Ovis aries
ENSOARG00000018575
I
0.889
ZKSCAN2
Monodelphis domestica
ENSMODG00000015452
I
0.853
ENSSHAG00000013237
Sarcophilus harrisii
ENSSHAG00000013237
I
0.840
ZSCAN29
Dasypus novemcinctus
ENSDNOG00000018427
I
0.740
ZSCAN29
Otolemur garnettii
ENSOGAG00000000128
I
0.737
ENSPPYG00000006412
Pongo abelii
ENSPPYG00000006412
I
0.737
ZSCAN29
Felis catus
ENSFCAG00000002712
I
0.737
ZSCAN29
Pan troglodytes
ENSPTRG00000006992
I
0.737
ZSCAN29
Gorilla gorilla
ENSGGOG00000002879
I
0.737
ZSCAN29
Tursiops truncatus
ENSTTRG00000016234
I
0.733
ENSSHAG00000012821
Sarcophilus harrisii
ENSSHAG00000012821
I
0.733
ENSSTOG00000006892
Ictidomys tridecemlineatus
ENSSTOG00000006892
I
0.733
ENSMPUG00000010249
Mustela putorius furo
ENSMPUG00000010249
I
0.733
ZSCAN29
Homo sapiens
ENSG00000140265
D
0.733
ZSCAN29
Callithrix jacchus
ENSCJAG00000002903
I
0.733
ZSCAN29
Choloepus hoffmanni
ENSCHOG00000009706
I
0.733
ZSCAN29
Microcebus murinus
ENSMICG00000010051
I
0.733
ZSCAN29
Equus caballus
ENSECAG00000012289
I
0.733
ENSNLEG00000004938
Nomascus leucogenys
ENSNLEG00000004938
I
0.733
ENSSSCG00000004709
Sus scrofa
ENSSSCG00000004709
I
0.729
Myotis_brandtii_ZSCAN29_10025802
Myotis brandtii
Myotis_brandtii_ZSCAN29_10025802
I
0.729
ZSCAN29
Canis familiaris
ENSCAFG00000012056
I
0.729
ZSCAN29
Monodelphis domestica
ENSMODG00000017820
I
0.729
ZSCAN29
Loxodonta africana
ENSLAFG00000001195
I
0.729
ENSPANG00000018475
Papio anubis
ENSPANG00000018475
I
0.725
ZSCAN29
Macaca mulatta
ENSMMUG00000017070
I
0.721
ENSCSAG00000009079
Chlorocebus sabaeus
ENSCSAG00000009079
I
0.721
ENSP00000380174
Macaca fascicularis
ENSP00000380174
I
0.721
ENSAMEG00000015432
Ailuropoda melanoleuca
ENSAMEG00000015432
I
0.720
ENSTSYG00000004828
Tarsius syrichta
ENSTSYG00000004828
I
0.716
ZSCAN29
Bos taurus
ENSBTAG00000014478
I
0.714
ENSBTAP00000014826-D2
Bos grunniens
ENSBTAP00000014826-D2
I
0.714
Zscan29
Mus musculus
ENSMUSG00000050619
I
0.709
ENSOANG00000022313
Ornithorhynchus anatinus
ENSOANG00000022313
I
0.706
ZSCAN29
Cavia porcellus
ENSCPOG00000001782
I
0.702
ZSCAN29
Erinaceus europaeus
ENSEEUG00000006869
I
0.702