CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nAv.1.0.1.g06053
(
Acanthocheilonema viteae
)
C2H2 ZF,Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
PF00505 (HMG_box)
IPR007087
IPR000910
nAv.1.0.1.g06053
T076773_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nAv.1.0.1.t06053-RA
Sox
57
124
NARSKSGYILFSAEVRKKVMQENPEAGFGEVSKIVGIEWKKLSEEQKKQYEIRAEYIANERAKQEARE
nAv.1.0.1.t06053-RA
C2H2 ZF
138
163
YMCKWQTCDFQYDNPEELYDHVKTVH
Links
Other
C2H2 ZF,Sox
family TFs
Other
Acanthocheilonema viteae
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
EEL_0000849501
Elaeophora elaphi
EEL_0000849501
N
1.000
OFLC_0000318001
Onchocerca flexuosa
OFLC_0000318001
N
0.989